Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq125 107 2e-18
>seq125
Length=94255
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || |||||| |||||| || |||||||| || | | | || || ||||||
Sbjct 36368 CACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTG-CGACCGTCCT 36310
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| |||||||||||| || | || | ||||||||| ||| ||| | || |||||||||
Sbjct 36309 CAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTTGTCCT 36250
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| ||| ||| | | |||||||| | ||| ||| ||||| || || || |
Sbjct 36249 GGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCT 36190
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || |||||||| || || || ||||||||
Sbjct 36189 TTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || || || || |||||||||||||||||| || | || || |||| ||
Sbjct 36596 CACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACCGTCTTC 36537
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||||||| || | || | ||||||||| ||| || | || ||||| |||
Sbjct 36536 CAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTG 36477
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| ||| ||| | | |||||||| | ||| ||| ||||| || || || ||
Sbjct 36476 GATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTT 36417
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || || || || ||||||||
Sbjct 36416 TCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421245378045134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |