Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq125 89.7 5e-13 >seq125 Length=94255 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 ||||||||||| ||| || |||||||| | ||| || ||| || | || || || Sbjct 36596 CACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACA--GCGTACGACCGTCT 36539 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| | | ||||| || || |||||||| || || || Sbjct 36538 TCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCC 36479 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || | ||| ||| ||| || || | || || || | |||||| || Sbjct 36478 TGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTC 36419 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || || || ||||||||||| Sbjct 36418 TTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||| | || || ||||| || | ||| || || | |||| Sbjct 36373 CGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCG 36314 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | | ||||| || || || ||||| || ||| Sbjct 36313 TCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTTG 36254 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | ||| ||| ||| || || | || || || | |||||| Sbjct 36253 TCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATA 36194 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| ||||| || || ||||||||||| Sbjct 36193 GTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448284845472240