Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq159 109 9e-20
seq8 95.1 2e-15
>seq159
Length=52874
Score = 109 bits (120), Expect = 9e-20
Identities = 87/102 (85%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 33579 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 33637
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||| ||||| ||||| |||||||| ||||||||| ||||||
Sbjct 33638 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTG 33679
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| | ||| |||||| || || |||| ||| |
Sbjct 33741 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGTCCTTCCTTGAGGGTGTCATCCGTGACG 33800
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||||||| | || ||||||| |
Sbjct 33801 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTACG 33860
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || ||||||| | || ||||| || |||||
Sbjct 33861 CCCTCAAGCGCCAGGGCCGTACCCTGTACGGTTTCGGTGGTTAA 33904
>seq8
Length=768349
Score = 95.1 bits (104), Expect = 2e-15
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| | | || || |||||||| || ||||||||||| |||||
Sbjct 377189 GCCAAGCGTCACAGGAAGATTT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 377247
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||| ||||| ||||| || ||||||||| ||||||
Sbjct 377248 CCGTCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCTG 377288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074163175862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |