Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq12 297 5e-75
>seq12
Length=708323
Score = 297 bits (328), Expect = 5e-75
Identities = 1038/1602 (65%), Gaps = 30/1602 (2%)
Strand=Plus/Plus
Query 363573 CAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGA 363632
||| || || |||| || || ||| || |||| ||||| || | | |||||||| ||
Sbjct 538638 CAACGCCGGTACTCCCAAGCCTCAGCTGGCTTCCTGCTTCCTCATCGACATGAAGGAGGA 538697
Query 363633 TTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGG 363692
||| |||||||||| || || || |||| || || | |||||||||| || ||
Sbjct 538698 CAGCATTGAGGGTATCTACGATACCCTGAAGACCTGCGCCATGATTTCCAAGACCGCCGG 538757
Query 363693 CGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAG 363751
|| || || | ||||| | |||| || || | ||| || ||| |||||
Sbjct 538758 TGGTATCGGCCTCAATGTCCACCGTATTCGCGCTACTGG-CAGCTATATTGCTGGCACCA 538816
Query 363752 GGGGATACTCG-AATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTAC 363810
|| ||| | || || || |||| ||||| ||||||| |||| || || | ||
Sbjct 538817 ACGG-TACCAGCAACGGCCTCATTCCTATGCTCCGTGTGTACAACAACACCGCCCGCTAT 538875
Query 363811 GTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCAT 363870
|||||||||||||| ||||| || || || || || || |||||||| |||
Sbjct 538876 GTCGACCAGGGTGGCAACAAGCGTCCCGGTGCATTCGCCATTTACCTCGAGCCGTGGCAT 538935
Query 363871 GCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCA 363930
|||||| | || || ||||| ||||| || ||| ||||| || || | || ||
Sbjct 538936 GCCGATGTCTTCAGCTTCCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGGTTCGCGCT 538995
Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGT 363990
||||| ||||| || || || ||| | | || | || |||||||| || || |||
Sbjct 538996 CGTGACCTGTTTTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAA-CAGAA 539054
Query 363991 AAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGA 364049
| | ||| | || | ||||| |||| || || |||||| |||| || | || ||
Sbjct 539055 CGGCACCTGGACTCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGA 539114
Query 364050 CGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCC 364109
||| | | ||||| ||||| |||| || |||||| || |||| |||| |||
Sbjct 539115 CGAGTTCGAGGCTCTGTACGAGCAGTACGAGAAGGAGGGTCGGGGTCGTGAGACCGTTCG 539174
Query 364110 CGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATAT 364169
|| |||||||| |||| ||||| | || | ||| | ||||| || | |||| ||
Sbjct 539175 TGCCCAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGGTCGAGACTGGCAACCCCTTCAT 539234
Query 364170 GTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCA 364229
| ||||||| || |||||||||||| ||||||| || ||||||| || | || |||
Sbjct 539235 GCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCA-TCCGCA 539293
Query 364230 G-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTA 364288
| |||||| || ||||||| | || ||||| || || || ||| || || || |
Sbjct 539294 GCTCCAACCTCTGCTGCGAGATTGTCGAGTACACTGCCCCTGATGAGGTCGCTGTCTGCA 539353
Query 364289 ACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AGATGGTACTTT-TGACCACC 364342
||||||| || | || ||||| | ||||| || || || | ||| |||| |
Sbjct 539354 ACCTTGCATCCCTGGCACTTCCTACCTTTGTCAATGTCGAGCAGGGAGTTTATGACTTCA 539413
Query 364343 AGCATCTTTATGACGTAACCTATCA--TGCTACT-TGCAATCTCGACAAGGTTATCGACA 364399
|| | ||| |||| || || ||| |||| | || || ||||| | |||||||
Sbjct 539414 AGAAGCTTCATGATGTCAC---TCAAGTGCTCGTCAAGAACCTGAACAAGATCATCGACA 539470
Query 364400 AGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTC 364459
|| | || || | || || || | | || ||||| |||||||| |||| |
Sbjct 539471 TCAACCACTACCCCGTGCCGGAGGCTAGGAGGAGCAACATGCGCCATCGCCCCATTGCTG 539530
Query 364460 TTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTG 364519
||||||| | || ||||| || | ||| || || ||| | || ||||| ||||
Sbjct 539531 TTGGTGTCAACGGTCTCGCCGATGCTTTCCTGGCTCTTCGTATGCCCTTCGATTCTCCTG 539590
Query 364520 ACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTT 364579
| || || || | ||||||| || || || || || || | ||||| |
Sbjct 539591 AGGCCAAGCACCTCAACATTCAGATCTTCGAGACCATCTACCACGCTGCTCTTACTGCCT 539650
Query 364580 CGTGTGATTTGGCAAA--AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTC 364637
| ||| | || || ||| | || || || | |||| ||| |||
Sbjct 539651 CCATTGAGCTCGCCAAGCAAC--ACGGCCCCTATGAGACGTTCCAGGGTAGCCCCGCTTC 539708
Query 364638 GCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGA 364697
|| || | | |||| ||| | ||||| | || ||| || ||| |||||||
Sbjct 539709 CCAAGGCATTCTGCAGTATGACATGTGGAACAAGGCCCCCACTGACCTGTGGGACTGGGA 539768
Query 364698 TACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTACAGCGCC 364754
| || | | || |||| ||| ||||||||| |||||| |||||
Sbjct 539769 CAGCCTGAAGGCTGAGGTCGCCCAGCACGGTGTCCGCAACTCCCTGCTCGTT---GCGCC 539825
Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814
|||||| || || ||||| ||||| || || ||||||||||||||| || | ||
Sbjct 539826 CATGCCTACTGCCTCTACCAGTCAGATTCTTGGCTTCAACGAGTGCTTCGAGCCTTACAC 539885
Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874
|| |||| || ||||| || | |||| || || | ||| || || | ||
Sbjct 539886 TTCGAACATTTACTCTCGCCGTGTCTTGGCCGGTGAGTTCCAGGTCGTCAACCCCTGGCT 539945
Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934
| ||||| || ||||| ||| |||||| ||| ||||||||| ||||| ||
Sbjct 539946 CCTGAAGGACCTGGTCGACCTCGGTCTGTGGTCGGACCAGATGAAGAACCGCATCATTGC 540005
Query 364935 CGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAA 364994
| || || || | ||| | ||||| | || || || | ||| | | |||||
Sbjct 540006 TTCCAACGGCTCCATCCAGCAAATTCCCAACATCCCGGATGACATCAAGGCGCTCTACAA 540065
Query 364995 AACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054
||||| ||||| | || ||| || || | | ||||| || || || ||||| ||
Sbjct 540066 GACCGTCTGGGAGCTCTCTCAGCGTACCATCGTCCAGATGGCTGCTGACCGTGGTGCCTT 540125
Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114
||| |||| ||||| | ||| | ||||| | || || | |||| | ||
Sbjct 540126 CATCGATCAGTCGCAGTCCCTCAACATTCACATGAAGGATCCTACGATGGGCAAGATCAC 540185
Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||||||| ||| ||| ||||| |||||| ||||| ||
Sbjct 540186 CTCCATGCACTTCGCCGGTTGGAAGCTCGGTCTCAAGACTGG 540227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303334663086788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |