Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq12 150 2e-31 seq95 134 1e-26 seq125 122 8e-23 seq63 102 8e-17 seq22 95.1 1e-14 >seq12 Length=708323 Score = 150 bits (166), Expect = 2e-31 Identities = 818/1285 (64%), Gaps = 37/1285 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| |||||||| ||||| || | || | ||| || ||| | || Sbjct 539936 TTGACGACCTGGAACTCACCGGCCAAGACACGGCGAGAGTAAATGTTCGAAGTGTAAGGC 539877 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| || || ||| ||| | || || |||||| ||| || Sbjct 539876 TCGAAGCACTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAACG 539817 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||| || || |||| || | |||| ||||| Sbjct 539816 AGCAGGGAGTTGCGGACACCGTGCTGGGCGACCTCAGCCTTCAGGCTGTCCCAGTCCCAC 539757 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||| || | || ||||||||| ||||||| |||||| | | |||||||| Sbjct 539756 AGGTCAGTGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCTA 539697 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 || || || | || | | || ||| ||||||||||| || |||| Sbjct 539696 CCCTGGAACG-TCT-CATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAGGCAGTAAGAG 539639 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | || || || |||||| || || ||||||| || | || ||| ||| Sbjct 539638 CAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCCTCAGGAGAATCGA 539579 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | ||||| || || | |||||||||||||| || | | || || | ||||| | Sbjct 539578 AGGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCAACAGCAATGGGGC 539519 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTT 145535 |||| |||||||||| |||| ||| | | || || | || |||||| || | Sbjct 539518 GATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCT 539459 Query 145536 TATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAG 145595 | |||| ||| || | || | || | | | | ||| | |||||| | Sbjct 539458 TGTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTC 539399 Query 145596 CCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCT 145655 ||| || || ||| || || | || | || || | || || || || || Sbjct 539398 CCTGCTCGACATTGACAAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCT 539339 Query 145656 CCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCA 145715 | || | | | |||| | || |||||| ||| | ||| | |||||| || | Sbjct 539338 CATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAA 539279 Query 145716 GATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAG 145775 | || | ||| || || || | |||||| ||||||||| |||||| | || ||||| Sbjct 539278 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAG 539219 Query 145776 TCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCTGCTG 145833 |||| ||||| | || || || | || || || | ||| ||||| || || | Sbjct 539218 TCTCGACCTGAGCCT-CAAGA-ATGGCGTACCAGAGCTTCTGGGCACGAACGGTCTCACG 539161 Query 145834 GTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATC 145893 || ||||| | ||||| | | ||| || |||| ||| || |||||| || Sbjct 539160 ACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTC 539101 Query 145894 GGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCG 145953 || || || || |||| |||||| |||||||| | ||| |||||| | ||| || Sbjct 539100 GGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACG 539041 Query 145954 CTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTC 146013 || ||| || | ||| || | |||||| ||||| | || ||| || || || | |||| Sbjct 539040 CTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAGC---GCGAACCTC 538984 Query 146014 AGC--ACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCACGGTT 146069 | || || ||| || | | ||| | || ||| || || |||||||| | Sbjct 538983 TTCCTTTCCGTGGTTCTTGC-GGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCT 538925 Query 146070 CAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTACCA 146126 | | || | ||||| || || || |||||||||||||| || | || | Sbjct 538924 CGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGG 538865 Query 146127 TGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG--GCTACGCCGTTCGT---AG- 146180 ||||||| | || || | ||| || || |||| || | || ||||| || || Sbjct 538864 TGTTGTTGTACACACGGAGCATAGGAATGAGGCCGTTGCTGGTA--CCGTTGGTGCCAGC 538807 Query 146181 AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGT 146240 | | || | |||| | ||| | | || ||||| | ||||| ||| ||| || Sbjct 538806 AATATA----GCTGCCAGTAGCGCGAATACGGTGGACATTGAGGCCGATACCACCGGCGG 538751 Query 146241 ACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GC 146297 |||||| || |||||| ||| | || || |||||||| || |||||||| || | Sbjct 538750 TCTTGGAAATCATGGCGCAGGTCTTC-AGGGTATCGTAGATACCCTCAATGCTGTCCTCC 538692 Query 146298 TTCGAATGCCGAGCAGAAAGCACGA 146322 ||| ||| ||| || ||||| || Sbjct 538691 TTC--ATGTCGATGAGGAAGCAGGA 538669 >seq95 Length=147769 Score = 134 bits (148), Expect = 1e-26 Identities = 333/500 (67%), Gaps = 9/500 (2%) Strand=Plus/Minus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158 ||||| |||||||||| || |||||| | || | | |||||||||| ||| Sbjct 14615 AAGAAGGCCGACTGGGCCCTGCGCTGGATCTGCGACAAGAACTCGACTTTCGCATCGCGC 14556 Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218 || | || |||||| ||| ||||| |||| || ||| || || ||||||| Sbjct 14555 CTGATCGCTTTTGCGGCTGTCGAGGGTATCTTCTTCAGTGGATCCTTCGCTTCCATCTTC 14496 Query 46219 TACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278 | | || | ||| |||||||||| || || || |||||||| || || || Sbjct 14495 TGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCATCTCTCGT 14436 Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC-TCGCGTGCACGACA 46336 |||||||| ||||||| ||||| || || || || | | ||| || || | | | Sbjct 14435 GACGAGGGTATGCATACCGACTTCGCTTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCC 14376 Query 46337 AGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGT 46396 ||| ||||| |||| || || ||| ||||| || | || |||||||||| Sbjct 14375 AGC-----CCCGATGCCGTCGAGAAGATCATCACCGAGGCCGTAGATATCGAGAAGGAGT 14321 Query 46397 TTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTC-AATGTGCGAC 46455 | | |||| || || |||| || || || ||||||||||| || || ||| || | Sbjct 14320 TCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGC-CAATCTTATGCGCCAG 14262 Query 46456 TACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCAC 46515 ||||| ||||| || || ||||| ||||| ||| || | | |||| | || Sbjct 14261 TACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCACTGGGCAACAAGAAGTTCTACAAC 14202 Query 46516 GCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTC 46575 | ||| || || || || ||| | |||||||| || | ||||| || || || ||| Sbjct 14201 TCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAGACCAACTTCTTC 14142 Query 46576 GAAAAGCGCGTCGGCGAGTA 46595 || |||||||| || || || Sbjct 14141 GAGAAGCGCGTTGGTGACTA 14122 >seq125 Length=94255 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| || || | || |||||||| || |||||||| || Sbjct 36385 CCACCACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAG 36326 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 36325 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 36266 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | ||||| | || || | Sbjct 36265 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36206 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || ||||| || ||||| |||||||| Sbjct 36205 TCGAGCGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || || || | ||| | |||||||||||| || ||||||||||| | Sbjct 35874 CCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAC 35815 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||||||||| ||| |||| | |||||||||||||| || Sbjct 35814 AGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGA 35755 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | ||||| | ||||||| Sbjct 35754 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACC 35695 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 35694 TCAAGGGTGATGGTCTTGCCGGT 35672 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| ||||| || || | ||||||||||||||||||||||| ||| Sbjct 36614 GCCACCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGA 36555 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||| || |||||||| || ||| |||| | ||||||||||||||| || Sbjct 36554 CAGCGTACGACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 36495 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| ||| ||| | | || | ||||| | || || | Sbjct 36494 AATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCAC 36435 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || ||||| |||||||| Sbjct 36434 CTCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387 Score = 109 bits (120), Expect = 5e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||| || |||||| |||||| ||||||||||| ||| | Sbjct 36122 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 36063 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| || |||||||||||||||||||| || || || || ||| ||| ||||| | Sbjct 36062 GATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTGACATT 36003 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 || | || || | ||||||| |||| ||| | ||| || || || Sbjct 36002 GTCGATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 35955 >seq63 Length=225829 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 138091 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138032 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 138031 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 137972 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 137971 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 137912 Query 131225 A 131225 | Sbjct 137911 A 137911 >seq22 Length=487495 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| || ||||| | || | ||| |||||||| || ||||||||||| Sbjct 64078 CCGCCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 64019 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| | || ||||||||||||||||| || Sbjct 64018 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGA 63959 Query 131128 ATTCCTTCTTTGTCGGT 131144 || || || ||||| || Sbjct 63958 ATGCCCTCCTTGTCTGT 63942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006109218560