Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq12 150 2e-31
seq95 134 1e-26
seq125 122 8e-23
seq63 102 8e-17
seq22 95.1 1e-14
>seq12
Length=708323
Score = 150 bits (166), Expect = 2e-31
Identities = 818/1285 (64%), Gaps = 37/1285 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| ||||| |||||||| ||||| || | || | ||| || ||| | ||
Sbjct 539936 TTGACGACCTGGAACTCACCGGCCAAGACACGGCGAGAGTAAATGTTCGAAGTGTAAGGC 539877
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||| || || ||| ||| | || || |||||| ||| ||
Sbjct 539876 TCGAAGCACTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAACG 539817
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | ||||||| || || |||| || | |||| |||||
Sbjct 539816 AGCAGGGAGTTGCGGACACCGTGCTGGGCGACCTCAGCCTTCAGGCTGTCCCAGTCCCAC 539757
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| ||| || | || ||||||||| ||||||| |||||| | | ||||||||
Sbjct 539756 AGGTCAGTGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCTA 539697
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
|| || || | || | | || ||| ||||||||||| || ||||
Sbjct 539696 CCCTGGAACG-TCT-CATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAGGCAGTAAGAG 539639
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
| || || || |||||| || || ||||||| || | || ||| |||
Sbjct 539638 CAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCCTCAGGAGAATCGA 539579
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| ||||| || || | |||||||||||||| || | | || || | ||||| |
Sbjct 539578 AGGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCAACAGCAATGGGGC 539519
Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTT 145535
|||| |||||||||| |||| ||| | | || || | || |||||| || |
Sbjct 539518 GATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCT 539459
Query 145536 TATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAG 145595
| |||| ||| || | || | || | | | | ||| | |||||| |
Sbjct 539458 TGTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTC 539399
Query 145596 CCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCT 145655
||| || || ||| || || | || | || || | || || || || ||
Sbjct 539398 CCTGCTCGACATTGACAAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCT 539339
Query 145656 CCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCA 145715
| || | | | |||| | || |||||| ||| | ||| | |||||| || |
Sbjct 539338 CATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAA 539279
Query 145716 GATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAG 145775
| || | ||| || || || | |||||| ||||||||| |||||| | || |||||
Sbjct 539278 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAG 539219
Query 145776 TCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCTGCTG 145833
|||| ||||| | || || || | || || || | ||| ||||| || || |
Sbjct 539218 TCTCGACCTGAGCCT-CAAGA-ATGGCGTACCAGAGCTTCTGGGCACGAACGGTCTCACG 539161
Query 145834 GTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATC 145893
|| ||||| | ||||| | | ||| || |||| ||| || |||||| ||
Sbjct 539160 ACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTC 539101
Query 145894 GGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCG 145953
|| || || || |||| |||||| |||||||| | ||| |||||| | ||| ||
Sbjct 539100 GGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACG 539041
Query 145954 CTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTC 146013
|| ||| || | ||| || | |||||| ||||| | || ||| || || || | ||||
Sbjct 539040 CTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAGC---GCGAACCTC 538984
Query 146014 AGC--ACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCACGGTT 146069
| || || ||| || | | ||| | || ||| || || |||||||| |
Sbjct 538983 TTCCTTTCCGTGGTTCTTGC-GGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCT 538925
Query 146070 CAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTACCA 146126
| | || | ||||| || || || |||||||||||||| || | || |
Sbjct 538924 CGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGG 538865
Query 146127 TGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG--GCTACGCCGTTCGT---AG- 146180
||||||| | || || | ||| || || |||| || | || ||||| || ||
Sbjct 538864 TGTTGTTGTACACACGGAGCATAGGAATGAGGCCGTTGCTGGTA--CCGTTGGTGCCAGC 538807
Query 146181 AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGT 146240
| | || | |||| | ||| | | || ||||| | ||||| ||| ||| ||
Sbjct 538806 AATATA----GCTGCCAGTAGCGCGAATACGGTGGACATTGAGGCCGATACCACCGGCGG 538751
Query 146241 ACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GC 146297
|||||| || |||||| ||| | || || |||||||| || |||||||| || |
Sbjct 538750 TCTTGGAAATCATGGCGCAGGTCTTC-AGGGTATCGTAGATACCCTCAATGCTGTCCTCC 538692
Query 146298 TTCGAATGCCGAGCAGAAAGCACGA 146322
||| ||| ||| || ||||| ||
Sbjct 538691 TTC--ATGTCGATGAGGAAGCAGGA 538669
>seq95
Length=147769
Score = 134 bits (148), Expect = 1e-26
Identities = 333/500 (67%), Gaps = 9/500 (2%)
Strand=Plus/Minus
Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158
||||| |||||||||| || |||||| | || | | |||||||||| |||
Sbjct 14615 AAGAAGGCCGACTGGGCCCTGCGCTGGATCTGCGACAAGAACTCGACTTTCGCATCGCGC 14556
Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218
|| | || |||||| ||| ||||| |||| || ||| || || |||||||
Sbjct 14555 CTGATCGCTTTTGCGGCTGTCGAGGGTATCTTCTTCAGTGGATCCTTCGCTTCCATCTTC 14496
Query 46219 TACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278
| | || | ||| |||||||||| || || || |||||||| || || ||
Sbjct 14495 TGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCATCTCTCGT 14436
Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC-TCGCGTGCACGACA 46336
|||||||| ||||||| ||||| || || || || | | ||| || || | | |
Sbjct 14435 GACGAGGGTATGCATACCGACTTCGCTTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCC 14376
Query 46337 AGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGT 46396
||| ||||| |||| || || ||| ||||| || | || ||||||||||
Sbjct 14375 AGC-----CCCGATGCCGTCGAGAAGATCATCACCGAGGCCGTAGATATCGAGAAGGAGT 14321
Query 46397 TTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTC-AATGTGCGAC 46455
| | |||| || || |||| || || || ||||||||||| || || ||| || |
Sbjct 14320 TCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGC-CAATCTTATGCGCCAG 14262
Query 46456 TACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCAC 46515
||||| ||||| || || ||||| ||||| ||| || | | |||| | ||
Sbjct 14261 TACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCACTGGGCAACAAGAAGTTCTACAAC 14202
Query 46516 GCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTC 46575
| ||| || || || || ||| | |||||||| || | ||||| || || || |||
Sbjct 14201 TCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAGACCAACTTCTTC 14142
Query 46576 GAAAAGCGCGTCGGCGAGTA 46595
|| |||||||| || || ||
Sbjct 14141 GAGAAGCGCGTTGGTGACTA 14122
>seq125
Length=94255
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||||||| || || | || |||||||| || |||||||| ||
Sbjct 36385 CCACCACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAG 36326
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| | ||||||||||||||| |||
Sbjct 36325 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 36266
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | || | ||||| | || || |
Sbjct 36265 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36206
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || || || ||||| || ||||| ||||||||
Sbjct 36205 TCGAGCGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| || || || | ||| | |||||||||||| || ||||||||||| |
Sbjct 35874 CCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAC 35815
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | ||||||||| ||| |||| | |||||||||||||| ||
Sbjct 35814 AGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGA 35755
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | ||||| | |||||||
Sbjct 35754 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACC 35695
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | ||| || |||||
Sbjct 35694 TCAAGGGTGATGGTCTTGCCGGT 35672
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| ||||| || || | ||||||||||||||||||||||| |||
Sbjct 36614 GCCACCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGA 36555
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || ||| || |||||||| || ||| |||| | ||||||||||||||| ||
Sbjct 36554 CAGCGTACGACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 36495
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || || || ||| ||| ||| | | || | ||||| | || || |
Sbjct 36494 AATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCAC 36435
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || || || || || || ||||| ||||||||
Sbjct 36434 CTCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
Score = 109 bits (120), Expect = 5e-19
Identities = 125/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| || |||||||| ||| || |||||| |||||| ||||||||||| ||| |
Sbjct 36122 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 36063
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||| || |||||||||||||||||||| || || || || ||| ||| ||||| |
Sbjct 36062 GATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTGACATT 36003
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210
|| | || || | ||||||| |||| ||| | ||| || || ||
Sbjct 36002 GTCGATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 35955
>seq63
Length=225829
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| |||
Sbjct 138091 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138032
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 138031 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 137972
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| |||| ||| | ||| || || || || || || ||||
Sbjct 137971 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 137912
Query 131225 A 131225
|
Sbjct 137911 A 137911
>seq22
Length=487495
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| || ||||| | || | ||| |||||||| || |||||||||||
Sbjct 64078 CCGCCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 64019
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| | || ||||||||||||||||| ||
Sbjct 64018 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGA 63959
Query 131128 ATTCCTTCTTTGTCGGT 131144
|| || || ||||| ||
Sbjct 63958 ATGCCCTCCTTGTCTGT 63942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472006109218560
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