Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq125 111 1e-19 seq63 93.3 4e-14 >seq125 Length=94255 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || | | |||||| | ||| | |||| Sbjct 35672 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACCATCGACAACGTCAAGAGC 35731 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||| || ||||| || || || || || ||||| || |||||||| Sbjct 35732 AAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGCAAG 35791 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| || ||| ||||||| | || ||||||||||| || || || || ||| | ||| Sbjct 35792 CAGTTGGAAGATGGCCGCACCCTGTCGGATTACAACATCCAGAAGGAGTCGACCCTTCAT 35851 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | || ||||||| ||| Sbjct 35852 CTCGTCCTCCGCCTGCGCGGTGGT 35875 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| || || |||||| | | Sbjct 36159 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36218 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || |||||||||||||| || || || || Sbjct 36219 GATACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGACCAG 36278 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | ||||| ||||| |||| || |||||| Sbjct 36279 CAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCGGACTACAAC 36338 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || || |||| | || || ||| Sbjct 36339 ATCCAGAAGGAGTCCACACTCCACTTGGTGCTGCGTCTTCGTGGTGGT 36386 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || |||||| | | Sbjct 36387 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36446 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || |||||||||||||| || || || Sbjct 36447 GATACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAG 36506 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | || || || || | ||||| |||||| Sbjct 36507 CAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGACGGTCGTACGCTGTCCGACTACAAC 36566 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| || || || Sbjct 36567 ATTCAAAAGGAGTCGAC 36583 >seq63 Length=225829 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || || | || ||| | ||| || |||| Sbjct 137926 ACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATCGACAATGTCAAGAGC 137985 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || || || || || |||||||| Sbjct 137986 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAG 138045 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | |||||| ||||||| | ||||| |||||||| || || Sbjct 138046 CAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 138089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722199096710