Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq125 167 4e-36
seq63 143 5e-29
seq135 111 3e-19
seq66 98.7 2e-15
seq95 86.0 1e-11
>seq125
Length=94255
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| |||| |||||||| || |||||||| || |||||||| || || |||
Sbjct 36385 CCACCACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAG 36326
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || ||||| || ||
Sbjct 36325 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 36266
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||| ||| |||||||| || | ||||| ||
Sbjct 36265 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36206
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct 36205 TCGAGCGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || ||||| ||||| ||||| || |||||
Sbjct 36613 CCACCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAC 36554
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| |||||||| ||||| | || ||||| || |||
Sbjct 36553 AGCGTACGACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 36494
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || || ||||| | ||| ||| |||||||| || | ||||| ||
Sbjct 36493 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36434
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || ||||| ||||||||||||||||| ||||||||
Sbjct 36433 TCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
Score = 145 bits (160), Expect = 1e-29
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | || | || || || ||||| || |||||||| ||||| ||
Sbjct 35874 CCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAC 35815
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| |||||||| |||||||| || || | || ||||| || |||
Sbjct 35814 AGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGA 35755
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| ||||||| |||||||| || | || || ||
Sbjct 35754 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACC 35695
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 35694 TCAAGGGTGATGGTCTTGCCGGTGA 35670
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | || | ||| || ||| ||| || |||||||| || |||||
Sbjct 36157 CCACCACGAAGGCGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 36098
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | | || ||||| || ||
Sbjct 36097 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGG 36038
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| || || ||||| | |||||| ||||||||||| | || || ||
Sbjct 36037 ATGCCCTCCTTATCCTGGATCTTCGACTTGACATTGTCGATGGTGTCAGACGACTCGACC 35978
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || || ||
Sbjct 35977 TCGAGGGTGATGGTCTTGCCAGT 35955
>seq63
Length=225829
Score = 143 bits (158), Expect = 5e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| |||||||| ||
Sbjct 138089 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138030
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| |||||||| || ||||| |||||| |||
Sbjct 138029 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 137970
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||||||||||||||||||
Sbjct 137969 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 137911
>seq135
Length=84039
Score = 111 bits (122), Expect = 3e-19
Identities = 321/489 (66%), Gaps = 9/489 (2%)
Strand=Plus/Minus
Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573
|||||| || ||||| |||||||||||||||| || || || || || || ||||| ||
Sbjct 48443 GAGCCAAGCAACGTTCTTGACGTCCATGTGGTTGGTGGGCTCATCAAGCAGGAGGATATC 48384
Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633
|| || | || ||| || | |||| ||||||||| ||||| || || || |||||
Sbjct 48383 AGGCTCCTCAAAGACGGCACGGGCAAGAGCCAGCTTCATCTTCCAACCACCTGAGAGGGA 48324
Query 225634 GCCGATTGAA-ACA-GAG-TGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCGTCTGGAT 225690
| ||| | | || ||| |||| | || |||||| ||||| |||| | |
Sbjct 48323 GGTGATGGGAGACTCGAGCTGCTCACGGACG---AAGCCGAACTCCTCGAGCTTGTCCTC 48267
Query 225691 AATGCGCTCGGGAGA---GCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAATCATA 225747
|| || |||| | || | | ||| | | | | | | | ||
Sbjct 48266 AACCTCCTTCTGAGACTTGGTGACACCAGCAGTCTCGAGCTTCTTCATGGTCCAGCCAAT 48207
Query 225748 TACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTG 225807
|||||| || | | | | | ||| | |||||| || ||||| || ||| || ||
Sbjct 48206 GACGGTCTGCTCAGTGTCGGCAGAGTCCAGGTCGTGCTCGACGTAGACGGTCTTGACCTC 48147
Query 225808 AGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTT 225867
||| | |||||| ||||| ||||| | || || || || | ||||| ||||
Sbjct 48146 AGACTGCTTGGGGAAACCCTCGAGCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGTCTT 48087
Query 225868 GCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGT 225927
||| | ||||| || |||| || ||||| | | || ||||| | | ||| | ||
Sbjct 48086 GCCGGAACCGTTAGGGCCGAGAAGACCGTAGCGCTGGCCACGCTTCAGGCGCAGGTGAGT 48027
Query 225928 GGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTC 225987
||| || |||||||| |||| ||||| |||||||| ||| | ||||||||||||
Sbjct 48026 CTGGTTGAGCAGGATCTTAGCACCGTAGGCCAGGGAGAAAGTGCAGTTGCACAGGTCCTC 47967
Query 225988 ACCCTCCTC 225996
||||||||
Sbjct 47966 GCCCTCCTC 47958
>seq66
Length=218528
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/189 (72%), Gaps = 6/189 (3%)
Strand=Plus/Plus
Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033
|||||| |||||||| | |||||||||||| ||| | |||| ||| |||| | || |
Sbjct 83483 GGCATAACGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCATGTGCATCTCGACGTGCTC 83542
Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093
| || ||||| | ||| | || |||| |||||| |||||| || |||
Sbjct 83543 AAGCGCGTGCTGCTTGATGTAACCAATACGCAGGTTGGGGTGCTTCTCAACCTTGCC--- 83599
Query 225094 AGTCGGTTG--TG-CCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATT 225150
||| | | || ||||||| || | ||||||||||||||||| |||||| ||||| ||
Sbjct 83600 AGTTTGCGGGATGACCTCGCCCGTCAAGACCTTGATGAGCGTAGACTTGCCAGCACCGTT 83659
Query 225151 GGGGCCAAT 225159
|| ||||||
Sbjct 83660 GGCGCCAAT 83668
>seq95
Length=147769
Score = 86.0 bits (94), Expect = 1e-11
Identities = 120/168 (71%), Gaps = 8/168 (5%)
Strand=Plus/Plus
Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682
|||||||| | || |||||||| | | || ||||| |||||| ||| |||||||
Sbjct 14845 AGGTTCTCGTTGACGATGCCATCAGAGGCGGCGAAGAAAGCGAGGACGTGGGAGATGAAG 14904
Query 10683 TGGCGCTCATCATCGTTCAG----TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTG 10738
||||||||| ||||| || || ||| ||||| | |||| | ||| |
Sbjct 14905 AAGCGCTCATCGTCGTTGAGACGCTTGTTC----CAGTCGTGAAGGTCCTTGGAGAGATC 14960
Query 10739 GACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
|| |||||| | |||||||||| ||| | |||||||||||||||||
Sbjct 14961 GATCTCCTCAGCCGTCCAGAAAGAGGCTTCAGCCTTCTTGTACATCTG 15008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921609336002480
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