Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq95 306 7e-78 seq12 282 8e-71 seq34 87.8 3e-12 >seq95 Length=147769 Score = 306 bits (338), Expect = 7e-78 Identities = 609/904 (67%), Gaps = 65/904 (7%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| | ||| |||||| || |||||||| || || Sbjct 15014 ATCTGGCAGATGTACAAGAAGGCTGAAGCCTCTTTCTGGACGGCTGAGGAGATCGATCTC 14955 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 |||||||| || |||| | | |||| | |||| || || ||| || Sbjct 14954 TCCAAGGACCTTCACGACTGGAACAAGC-GTCTCAACGACGATGAGCGCTTCTTCATCTC 14896 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || || ||||||||||||||||| ||||| ||||| |||||||| | | | Sbjct 14895 CCACGTCCTCGCTTTCTTCGCCGCCTCTGATGGCATCGTCAACGAGAACCTTGTCGAGCG 14836 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 14835 TTTCAGCTCCGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 14776 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| | || || |||| ||||| || ||| Sbjct 14775 GGAGAACATTCACTCCGAGACCTACTCTCTCCTCATCGACACCTACATTAGCGAGCCCAG 14716 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGA--------------------------CG 42629 |||| ||| |||||||| ||||| || | || Sbjct 14715 GCAGCGCAACTACCTGTTCAACGCCATCGACAACAGTAAGTTACCATACTCCACGACGCG 14656 Query 42630 ATGC-------------------------CCTGCATCAAGAAGAAGGCGGACTGGGCGCT 42664 |||| | || |||||||||||||| |||||||| || Sbjct 14655 ATGCATGGATCACTGACGCTTCATAGTTCCTTGTATCAAGAAGAAGGCCGACTGGGCCCT 14596 Query 42665 CAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723 ||||||| | | | || | | || |||| | | ||| | || ||| | || | Sbjct 14595 GCGCTGGATCT-GCGACAAGAACTCGACTTTCGCATCGCGCCTGATCGCTTTTGCGGCTG 14537 Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTG 42782 ||||||| ||||||||| || ||||||| |||||||||||||| ||| || || Sbjct 14536 TCGAGGGTATCTTCTTCAGTGGATCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGCC 14477 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 || |||||||| ||||| ||||| ||||| |||||| | |||||||| |||||| Sbjct 14476 TC-ATGCCCGGTCTCACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTATGCATACC 14418 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC 42902 ||||| || ||||| ||||||||| ||| ||| | |||||| || ||| Sbjct 14417 GACTTCGCTTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCCAGCCCCGATGCCGTC 14361 Query 42903 CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC 42962 | |||||||| |||||||| || ||||||||||||||||||||| | | || ||| Sbjct 14360 GAGAAGATCATCACCGAGGCCGTAGATATCGAGAAGGAGTTCCTCACGGATGCCCTTCCC 14301 Query 42963 GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGAC 43022 || | || ||||||||||| | | || ||| || ||||||| ||| |||||| ||| Sbjct 14300 GTCGCTCTCCTCGGCATGAACGCCAATCTTATGCGCCAGTACATTGAGTTCGTCGCAGAC 14241 Query 43023 CATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTT 43081 | || || ||| || |||| || |||||||| | | |||||||||||| Sbjct 14240 CGCCTGCTGGTGGCA-CTGGGCAACAAGAAGTTCTACAACTCCACCAACCCCTTCGACTT 14182 Query 43082 TATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTA 43141 ||||||||||||||| | | |||||||||||||| |||||||||||||| | ||||| Sbjct 14181 CATGGAGAACATCTCGCTTAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTA 14122 Query 43142 CCAG 43145 |||| Sbjct 14121 CCAG 14118 >seq12 Length=708323 Score = 282 bits (312), Expect = 8e-71 Identities = 1094/1701 (64%), Gaps = 81/1701 (5%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| || |||| |||| ||| | || ||||||||||| |||||||| | Sbjct 540274 TGAACTGGATGGGAGCAGCGGCAGCCTGGGTACGGAGATAGTACATGCCAGTCTTGAGAC 540215 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | ||| || || |||||||| || | ||| |||| | || || | Sbjct 540214 CGAGCTTCCAACCGGCGAAGTGCATGGAGGTGATCTTGCCCATCGTA------GGATCCT 540161 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 | | ||| | ||||||||||| ||| |||| ||||| | || || || | Sbjct 540160 TCATGT---GAATG---TTGAGGGACTGCGACTGATCGATGAAGGCACCACGGTCAGCAG 540107 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| || || ||| | |||||| | ||| | | |||||||||| | ||||| | Sbjct 540106 CCATCTGGACGATGGTACG-CTGAGAGAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATG 540048 Query 243980 TGCTCGGGGAACCCTTCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037 | || |||| || | || | ||| | ||||| ||| | |||| || | Sbjct 540047 TCATCCGGGATG--TTGGGAATTTGCTGGATGGAGCCGTTGGAAGCAATGATGCGGTTCT 539990 Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCA 244094 ||| | || |||||| || | | |||| ||| |||| ||| | || | Sbjct 539989 TCATCTGGTCCGACCACAGACCGAGGTCGACCAGGTCCTT---CAGGAGCCAGGGGTTGA 539933 Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 | ||||| ||||| || | || || ||||| ||| | ||| || ||||||| Sbjct 539932 CGACCTGGAACTCACCGGCCAAGACACGGCGAGAGTAAATGTTCGAAGTGTAAGGCTCGA 539873 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || ||| || ||| || ||||| || ||||| |||||||||| || |||| Sbjct 539872 AGCACTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAACGAGCA 539813 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATG--CGGAGTCTG-AGCTCGTTCCAGTCCCACA 244271 | ||| | || |||||| ||| | | || || || || ||||||||||| Sbjct 539812 GGGAGTTGCGGACACCGTGC---TGGGCGACCTCAGCCTTCAGGCTGTCCCAGTCCCACA 539756 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331 | | | | || ||| | || |||||||||| ||||||| | || | | Sbjct 539755 GGTCAGTGGGGGCCTTG---TT------CCACATGTCATACTGCAGAATGCCTTGGGAAG 539705 Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGT 244391 ||||||| |||| | | ||| ||||| |||| ||| ||| |||| | | | Sbjct 539704 CGGGGCTACCCTGGAACGTCTCATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAGGCAG 539645 Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451 || || |||| ||||||||||||||||||| |||| | || || | ||| | Sbjct 539644 TAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGT-----GCTTGGCCTC 539590 Query 244452 AGGTGAA-----GGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGAT 244506 ||| ||| ||| || | | || ||| | ||||| || || | || || | Sbjct 539589 AGGAGAATCGAAGGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCAAC 539530 Query 244507 GCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566 | ||||| | || ||| ||||| | | | || || ||||||||||| |||| Sbjct 539529 AGCAATGGGGCGATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTGAT 539470 Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAA 244626 |||||| | |||||| ||||| | || || | ||| || ||| || || Sbjct 539469 GTCGATGATCTTGTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTGAA 539410 Query 244627 GTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACG 244684 ||| || | ||| | || | | || | ||||| || | || || | | Sbjct 539409 GTCATAAAC-------TCC-CTGC--TCGACAT--TGACAAAG--GTAGGAAGTGCCAGG 539364 Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 || ||||||||||| || ||||| || | | ||||||| |||||||||| |||| Sbjct 539363 GATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACAATCTCGCAGCAG 539304 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 ||||| || ||||||||| |||| || || ||| |||| ||||||| |||| Sbjct 539303 AGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCC 539244 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| ||||||||||| || ||||||| ||| || | || | | || |||||| Sbjct 539243 TTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCCTCAAGAATGGCGTACCAGAGC 539184 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | || || ||| ||| || ||||| |||||| | |||||| ||| Sbjct 539183 TTCTGGGCACGAACGGTCTCACGACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCC 539124 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984 ||||||||| ||| |||| ||| | || || |||||| |||||||| ||| || Sbjct 539123 TCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTC 539064 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 || |||| | | ||| | || ||||||||| ||||||||||| || || | || Sbjct 539063 CAGGTGCCGTTCTGTTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAAC 539004 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 ||||| | | | ||| ||| || |||||| | || || | ||| ||| Sbjct 539003 AGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAAGCTGAAG 538944 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 || ||| | ||||| ||||| | ||| | |||| || ||||| ||||||||||| ||| Sbjct 538943 ACATCGGCATGCCACGGCTCGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCC 538884 Query 245165 TGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 ||||| | | | || ||| |||| | | || || |||| | | |||||| Sbjct 538883 TGGTCGA----CATAGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATGAGGCCGTT 538828 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT 245280 | ||||||||||| || ||| ||| | | | | | | | ||||||| Sbjct 538827 GCTGGTACCGTTGGTGCCAGCAATATAGCTGCCAGTAGC---GCGAATAC-GGTGGACAT 538772 Query 245281 ----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336 ||| | || |||||| |||||| || | ||||||| |||| | ||| || | Sbjct 538771 TGAGGCCGATACCACCGGCGGTCTTGGAAATCATGGCGCAGGTCTTCAGGGTATCGTAGA 538712 Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGG 245396 | ||||| ||||||||| |||||||| || || |||||||| | |||||| ||||||| Sbjct 538711 TACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGCCAGCTGAGGCTTGG 538652 Query 245397 GGCTGCACGAGTTGAACAGAG 245417 | | | | |||||| |||| Sbjct 538651 GAGTACCGGCGTTGAAGAGAG 538631 >seq34 Length=360957 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/223 (70%), Gaps = 10/223 (4%) Strand=Plus/Plus Query 242847 CTGATCATCCTGGAAGGCGTCGATCGTTCGGGTAAGTCGACGCAGT---GTCGCATGCTG 242903 || ||| |||| |||||| |||| || | || ||||||||||| | ||||| || Sbjct 148556 CTCATCGTCCTTGAAGGCCTCGACCGCGCTGGCAAGTCGACGCAATGCGGTCGC---CTC 148612 Query 242904 GTCAAGGCCCTGCTGGAGATGGG--AGTCGAGGCCGAGCTGATGAGGTTCCCGGACAGGA 242961 |||| ||||| || |||| || || | || ||| ||| | ||||||||| ||| Sbjct 148613 GTCACTCGCCTGCAAGATTTGGGTCAG-CGCGTCC-AGCACATGCGCTTCCCGGACCGGA 148670 Query 242962 CCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAACAAGAGCGATCTGGACGATC 243021 | || || ||||| |||||||| ||| | ||| || | || ||| || | || |||| Sbjct 148671 CGACACCCATCGGCCAGATGATTAACGCCTACTTGACCGGCACGAGTGAGCAAGAGGATC 148730 Query 243022 ACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCCGC 243064 |||| | || | || || || || ||||| ||||| || || Sbjct 148731 ACGTTATCCATTTGCTCTTTTCTGCGAACCGCTGGGAGGCTGC 148773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944325813991840