Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq95 118 2e-21 >seq95 Length=147769 Score = 118 bits (130), Expect = 2e-21 Identities = 262/389 (67%), Gaps = 8/389 (2%) Strand=Plus/Minus Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412 ||||||| |||||| ||| || | ||||| || ||| | | ||||||||| ||| Sbjct 14503 CCATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCA 14444 Query 243413 TCAGTCGCGACGAGGGCCTTCA--CCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCA 243470 || ||| |||||||| | || || || |||| | || ||| || | || | Sbjct 14443 TCTCTCGTGACGAGGGTATGCATACCGAC--TTCGCTTGCCTGCTGTTCTCGCACATCAA 14386 Query 243471 GAACAAGCTACCATTC--GAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAA 243528 | |||| ||| | || | ||| | | |||||||| || || || || | ||| Sbjct 14385 GTCGAAGC--CCAGCCCCGATGCCGTCGAGAAGATCATCACCGAGGCCGTAGATATCGAG 14328 Query 243529 AAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATG 243588 ||||| ||| | || || |||| | || | ||||||||| | | || ||| Sbjct 14327 AAGGAGTTCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGCCAATCTTATG 14268 Query 243589 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTG 243648 | |||||||| || ||||| || |||||| | | | || || || | |||| | Sbjct 14267 CGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCACTGGGCAACAAGAAGTTC 14208 Query 243649 TACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAAC 243708 |||||||||| |||||||| | ||| |||||| ||| |||||| | || || || ||| Sbjct 14207 TACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAGACCAAC 14148 Query 243709 TTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 |||||||| ||||| || |||| || || Sbjct 14147 TTCTTCGAGAAGCGCGTTGGTGACTACCA 14119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102863975842900