Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq12 150 2e-31
seq95 95.1 1e-14
>seq12
Length=708323
Score = 150 bits (166), Expect = 2e-31
Identities = 676/1059 (64%), Gaps = 19/1059 (2%)
Strand=Plus/Minus
Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC-GGTGGAGGCTGTGGGCAT 114012
||||| ||||| |||||||| ||| | |||||| | | | ||| ||||| || |||||
Sbjct 539885 GTGTAAGGCTCGAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTAGAGGCAGTAGGCAT 539827
Query 114013 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTC 114072
||| || | ||| ||| ||| |||| ||| | | | |||| ||| |||
Sbjct 539826 GGGCGCAACGAGCAGGGAGTTGCGGACACCGTGCTGGGCGACCTCAGCCTTCAGGCTGTC 539767
Query 114073 CCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130
|||||| | | | || | | || | |||||| ||| |||| || || ||||||
Sbjct 539766 CCAGTCCCACAGGTCAG--TGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGG 539709
Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC---GGAG 114187
|| || || |||| || ||||| || ||||| | || || | || ||||
Sbjct 539708 GAAGCGGGGCTACCCTGGAACGTCTCATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAG 539649
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247
|| || || ||||| || || ||||| || || || || | |||||||
Sbjct 539648 ---GCAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCC 539592
Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307
|| ||||| || | | || | || |||| |||||||| | ||||||
Sbjct 539591 TCAGGAGAATCGAAGGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCA 539532
Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTC 114367
| |||| |||||||| | ||| || | | | ||| | |||||| || ||
Sbjct 539531 ACAGCAATGGGGCGATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTG 539472
Query 114368 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 114427
| ||||| | | | || || || ||| || || | |||| ||||||||||| | |
Sbjct 539471 ATGTCGATGATCTTGTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTG 539412
Query 114428 TAATCA-AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 114486
| ||| ||||| | | ||| |||||||| | ||||||| || | || || || ||
Sbjct 539411 AAGTCATAAACTCCCTG-CTCGACATTGACAAAGGTAGGAAGTGCCAGGGATGCAAGGTT 539353
Query 114487 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 114546
|| |||| | |||||| |||||||||| | ||| || || | || || ||
Sbjct 539352 GCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCT 539293
Query 114547 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 114606
|||||||| | |||||| || || ||| ||| || |||||||| |||||
Sbjct 539292 GCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCAT 539233
Query 114607 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTG 114665
| | || | || ||||| || | || ||||| || | ||||| | || | |||
Sbjct 539232 GAAGGGGTTGCCAGTCTCGACCTGAGCCTCAAGAATGGCGTACCAGAGCTTCTG-GGCAC 539174
Query 114666 GCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 114725
| || || | | || ||||||| |||||||| ||| || || || ||||| |
Sbjct 539173 GAACGGTCTCACGACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGT 539114
Query 114726 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 114785
| || | | || | || || || || | ||||| | |||| ||| ||
Sbjct 539113 CGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGT 539054
Query 114786 CCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGAC 114845
|| || ||||||||||||||||| || |||||||| ||||| | || || || |||
Sbjct 539053 TCTGTTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAG 538994
Query 114846 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 114905
|||| | ||||| | || || || || | || | ||| | || ||| || |
Sbjct 538993 CGCGAACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAAGCTGAAGACATCGGCAT 538934
Query 114906 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACAT 114962
||||||| || ||||| | |||| || || ||| ||| |||||| ||||
Sbjct 538933 GCCACGGCTCGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACAT 538874
Query 114963 ACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001
| | || ||| || | || || ||||| |||||||
Sbjct 538873 AGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATGA 538835
>seq95
Length=147769
Score = 95.1 bits (104), Expect = 1e-14
Identities = 345/525 (66%), Gaps = 30/525 (6%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816
|||||| ||||| ||||||||||||||||| ||||| |||| |||| ||| |||||||
Sbjct 14121 GTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTT-AAGCGAGATGTTCTCCA 14179
Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAG 125871
| || || || ||||| | ||||| | | |||||| |||| | ||
Sbjct 14180 TGAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTG----CCCAGTGCCACC-AG 14234
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
|| || || | |||| |||||||||||| ||| | | |||||| |||| |||
Sbjct 14235 CAGGCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGCGTTCATGCCGAGGAG 14294
Query 125932 -GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGA 125990
| || || || || ||| || |||| ||||||| || || ||||| || | ||
Sbjct 14295 AGCGACG-GGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGA 14353
Query 125991 TGGCGTGAATGGTGTCCACCCCAGG--TCTA-TTGCGCAAAGT-CTTGAAGAGTTCCACG 126046
| | | || || | || || | ||| | || | ||| || || |
Sbjct 14354 TCTTCTCGACGGCATCGGGGCTGGGCTTCGACTTG----ATGTGCGAGAACAG---CAGG 14406
Query 126047 ---GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGT 126103
|| || || || | |||||||||||| |||||||| || || ||||| ||
Sbjct 14407 CAAGCGAAGTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGA 14466
Query 126104 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAG 126163
|| |||||||| || |||||||||| |||||| || | | || || || |||||||
Sbjct 14467 CCGGGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAG 14526
Query 126164 ATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA 126223
|| ||||| ||| ||| || || | || ||| || || | || | |||| ||
Sbjct 14527 ATACCCTCGACAGCCGCAAAAGCGATCAGGCGCGATGCGAAAG-TCGAGTTCTTGTCGCA 14585
Query 126224 -AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267
| ||| || ||||| | ||||| |||| |||||| || ||
Sbjct 14586 GATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATACAAGGAAC 14630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597345132512720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |