Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq12 150 2e-31 seq95 95.1 1e-14 >seq12 Length=708323 Score = 150 bits (166), Expect = 2e-31 Identities = 676/1059 (64%), Gaps = 19/1059 (2%) Strand=Plus/Minus Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC-GGTGGAGGCTGTGGGCAT 114012 ||||| ||||| |||||||| ||| | |||||| | | | ||| ||||| || ||||| Sbjct 539885 GTGTAAGGCTCGAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTAGAGGCAGTAGGCAT 539827 Query 114013 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTC 114072 ||| || | ||| ||| ||| |||| ||| | | | |||| ||| ||| Sbjct 539826 GGGCGCAACGAGCAGGGAGTTGCGGACACCGTGCTGGGCGACCTCAGCCTTCAGGCTGTC 539767 Query 114073 CCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 |||||| | | | || | | || | |||||| ||| |||| || || |||||| Sbjct 539766 CCAGTCCCACAGGTCAG--TGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGG 539709 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC---GGAG 114187 || || || |||| || ||||| || ||||| | || || | || |||| Sbjct 539708 GAAGCGGGGCTACCCTGGAACGTCTCATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAG 539649 Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247 || || || ||||| || || ||||| || || || || | ||||||| Sbjct 539648 ---GCAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCC 539592 Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307 || ||||| || | | || | || |||| |||||||| | |||||| Sbjct 539591 TCAGGAGAATCGAAGGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCA 539532 Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTC 114367 | |||| |||||||| | ||| || | | | ||| | |||||| || || Sbjct 539531 ACAGCAATGGGGCGATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTG 539472 Query 114368 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 114427 | ||||| | | | || || || ||| || || | |||| ||||||||||| | | Sbjct 539471 ATGTCGATGATCTTGTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTG 539412 Query 114428 TAATCA-AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 114486 | ||| ||||| | | ||| |||||||| | ||||||| || | || || || || Sbjct 539411 AAGTCATAAACTCCCTG-CTCGACATTGACAAAGGTAGGAAGTGCCAGGGATGCAAGGTT 539353 Query 114487 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 114546 || |||| | |||||| |||||||||| | ||| || || | || || || Sbjct 539352 GCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCT 539293 Query 114547 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 114606 |||||||| | |||||| || || ||| ||| || |||||||| ||||| Sbjct 539292 GCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCAT 539233 Query 114607 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTG 114665 | | || | || ||||| || | || ||||| || | ||||| | || | ||| Sbjct 539232 GAAGGGGTTGCCAGTCTCGACCTGAGCCTCAAGAATGGCGTACCAGAGCTTCTG-GGCAC 539174 Query 114666 GCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 114725 | || || | | || ||||||| |||||||| ||| || || || ||||| | Sbjct 539173 GAACGGTCTCACGACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGT 539114 Query 114726 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 114785 | || | | || | || || || || | ||||| | |||| ||| || Sbjct 539113 CGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGT 539054 Query 114786 CCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGAC 114845 || || ||||||||||||||||| || |||||||| ||||| | || || || ||| Sbjct 539053 TCTGTTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAG 538994 Query 114846 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 114905 |||| | ||||| | || || || || | || | ||| | || ||| || | Sbjct 538993 CGCGAACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAAGCTGAAGACATCGGCAT 538934 Query 114906 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACAT 114962 ||||||| || ||||| | |||| || || ||| ||| |||||| |||| Sbjct 538933 GCCACGGCTCGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACAT 538874 Query 114963 ACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 | | || ||| || | || || ||||| ||||||| Sbjct 538873 AGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATGA 538835 >seq95 Length=147769 Score = 95.1 bits (104), Expect = 1e-14 Identities = 345/525 (66%), Gaps = 30/525 (6%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| ||||| ||||||||||||||||| ||||| |||| |||| ||| ||||||| Sbjct 14121 GTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTT-AAGCGAGATGTTCTCCA 14179 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAG 125871 | || || || ||||| | ||||| | | |||||| |||| | || Sbjct 14180 TGAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTG----CCCAGTGCCACC-AG 14234 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 || || || | |||| |||||||||||| ||| | | |||||| |||| ||| Sbjct 14235 CAGGCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGCGTTCATGCCGAGGAG 14294 Query 125932 -GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGA 125990 | || || || || ||| || |||| ||||||| || || ||||| || | || Sbjct 14295 AGCGACG-GGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGA 14353 Query 125991 TGGCGTGAATGGTGTCCACCCCAGG--TCTA-TTGCGCAAAGT-CTTGAAGAGTTCCACG 126046 | | | || || | || || | ||| | || | ||| || || | Sbjct 14354 TCTTCTCGACGGCATCGGGGCTGGGCTTCGACTTG----ATGTGCGAGAACAG---CAGG 14406 Query 126047 ---GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGT 126103 || || || || | |||||||||||| |||||||| || || ||||| || Sbjct 14407 CAAGCGAAGTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGA 14466 Query 126104 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAG 126163 || |||||||| || |||||||||| |||||| || | | || || || ||||||| Sbjct 14467 CCGGGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAG 14526 Query 126164 ATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA 126223 || ||||| ||| ||| || || | || ||| || || | || | |||| || Sbjct 14527 ATACCCTCGACAGCCGCAAAAGCGATCAGGCGCGATGCGAAAG-TCGAGTTCTTGTCGCA 14585 Query 126224 -AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 | ||| || ||||| | ||||| |||| |||||| || || Sbjct 14586 GATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATACAAGGAAC 14630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597345132512720