Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq125 105 7e-18 seq22 87.8 2e-12 >seq125 Length=94255 Score = 105 bits (116), Expect = 7e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | || || ||||||| ||||| || || || ||||||||||| | Sbjct 35875 ACCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 35816 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | |||||||||||| | || || ||||||||||| || || Sbjct 35815 CAGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 35756 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 ||| ||||| || || || || || ||| || || | |||| ||| || || Sbjct 35755 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTAT--CCGACGACTCG 35698 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGT 64419 || || | || | |||||||||||| Sbjct 35697 ACCTCAAGGGTGATGGTCTTGCCGGT 35672 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || |||||||||||||| || | | || || ||||||| |||||||| ||| Sbjct 36583 GTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACCGTCTTCCAGCTGCTTACCG 36524 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || ||||| || || || || || || || ||| Sbjct 36523 GCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTC 36464 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | ||||| || | || | ||||| || || | || Sbjct 36463 ACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGGGTC 36404 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 36403 TTGACGAAGATCTGCAT 36387 >seq22 Length=487495 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | ||||| || |||| || || || || || ||||||||||| | Sbjct 64079 ACCGCCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 64020 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || |||||||||||||| || |||| | ||||||||||| || || Sbjct 64019 AAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGG 63960 Query 64336 AATTCCTTCTTTTTCT 64351 ||| || || || ||| Sbjct 63959 AATGCCCTCCTTGTCT 63944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499637717534960