Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq125 105 7e-18
seq22 87.8 2e-12
>seq125
Length=94255
Score = 105 bits (116), Expect = 7e-18
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | || || ||||||| ||||| || || || ||||||||||| |
Sbjct 35875 ACCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 35816
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | ||||| | |||||||||||| | || || ||||||||||| || ||
Sbjct 35815 CAGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 35756
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393
||| ||||| || || || || || ||| || || | |||| ||| || ||
Sbjct 35755 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTAT--CCGACGACTCG 35698
Query 64394 ACTTCTACAGTTACGGTCTTGCCGGT 64419
|| || | || | ||||||||||||
Sbjct 35697 ACCTCAAGGGTGATGGTCTTGCCGGT 35672
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || |||||||||||||| || | | || || ||||||| |||||||| |||
Sbjct 36583 GTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACCGTCTTCCAGCTGCTTACCG 36524
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| ||||||||||| || ||||| || || || || || || || |||
Sbjct 36523 GCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTC 36464
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||||| | ||||| || | || | ||||| || || | ||
Sbjct 36463 ACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGGGTC 36404
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 36403 TTGACGAAGATCTGCAT 36387
>seq22
Length=487495
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| |||| | ||||| || |||| || || || || || ||||||||||| |
Sbjct 64079 ACCGCCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 64020
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || |||||||||||||| || |||| | ||||||||||| || ||
Sbjct 64019 AAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGG 63960
Query 64336 AATTCCTTCTTTTTCT 64351
||| || || || |||
Sbjct 63959 AATGCCCTCCTTGTCT 63944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499637717534960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |