Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq12 255 6e-63
>seq12
Length=708323
Score = 255 bits (282), Expect = 6e-63
Identities = 967/1491 (65%), Gaps = 56/1491 (4%)
Strand=Plus/Plus
Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962
|| |||||||| || || || ||| ||| || |||| || ||||| || ||| | ||
Sbjct 538633 CTCTTCAACGCCGGTACTCCCAAGCCTCAGCTGGCTTCCTGCTTCCTCATCGAC-ATGAA 538691
Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022
|| ||| ||| || || | ||| | ||| ||| ||| || | || || ||
Sbjct 538692 GGAGGACAGCATTGAGGGTATCTACGATACCCTGAAGACCTGCGCCATGATTTCCAAGAC 538751
Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACATCCGC 94080
||| || || ||||| ||| ||||||| |||| || || | || ||| ||
Sbjct 538752 CGCCGGTGGTATCGGCCTCAATGTCCAC--CGTATTCGCGCTACTGGCAGCTATATTGCT 538809
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
|| ||||| || ||| |||||||||| | ||||||||||| || | ||||||| | ||
Sbjct 538810 GGCACCAACGGTACCAGCAACGGCCTCATTCCTATGCTCCGTGTGTACAACAACACCGCC 538869
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
||||| || ||||||||||| | | | ||| | ||||| | || ||||||||
Sbjct 538870 CGCTATGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCATTCGCCATTTACCTCGAGCCG 538929
Query 94201 TGGCACGCGGACGTG--CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGG 94258
||||| || || || ||| ||| | ||||| || ||||||||||| || || ||
Sbjct 538930 TGGCATGCCGATGTCTTCAGC--TTCCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGG 538987
Query 94259 AGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCG 94318
| || | ||||| || |||||||| ||| | || || || || ||||| || ||||
Sbjct 538988 TTCGCGCTCGTGACCTGTTTTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCG 539047
Query 94319 AGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTT 94378
| | ||| | |||||| ||| | || ||||| || || || || || ||||||| |
Sbjct 539048 AACAGAACGGCACCTGGACTCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCT 539107
Query 94379 GTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAA 94436
|| || || || || || |||| | | ||||| | |||| || | |
Sbjct 539108 ACGG--CGACGAGTTCGAGGCTCTGTACGAGCAGTACGAGAAGGAGGGTCGGGGTCGTGA 539165
Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496
| | ||| |||||| ||| | || | || | ||||| ||||| || |
Sbjct 539166 GACCGTTCGTGCCCAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGGTCGAGACTGGCAA 539225
Query 94497 GCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGG 94555
|||| ||| ||| |||||| | ||| |||| |||| ||||||| || |||| ||
Sbjct 539226 CCCCTTCATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACCTTGGCA 539284
Query 94556 TGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTG 94615
||| ||||| || || ||| ||||||||||||||| ||| | || || ||| | |
Sbjct 539285 CCATCCGCAGCTCCAACCTCTGCTGCGAGATTGTCGAGTACACTGCCCCTGATGAGGTCG 539344
Query 94616 CTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA-CA---CG 94671
|||| || ||||| | ||| | || | || || || ||| | | || |
Sbjct 539345 CTGTCTGCAACCTTGCATCCCTGGCACTTCCTACCTTTGT---CAATGTCGAGCAGGGAG 539401
Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731
| || |||| || ||||| | || | | | | ||| ||||
Sbjct 539402 TTTATGACTTC----------AAGAAGCTTCATGATGTCACTCAAGTGCTCGTCAAGAAC 539451
Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGC--GGAGAACTCAAACC 94789
||||||| | | ||||||| ||| ||||||||| |||||||| |||| | |||
Sbjct 539452 CTGAACAAGATCATCGACATCAACCACTACCCCGTGCCGGAGGCTAGGAGGA--GCAACA 539509
Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849
|| ||||| ||||| | | || ||| | ||| |||| || || | || | |
Sbjct 539510 TGCGCCATCGCCCCATTGCTGTTGGTGTCAACGGTCTCGCCGATGCTTTCCTGGCTCTTC 539569
Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909
|| |||||| ||| ||| || || | | || | | || ||||| | ||| |
Sbjct 539570 GTATGCCCTTCGATTCTCCTGAGGCCAAGCACCTCAACATTCAGATCTTCGAGACCATCT 539629
Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAAT 94969
| ||| || | | ||| | | | |||| | | ||| || | ||
Sbjct 539630 ACCACGCTGCTCTTACTGCCTCCATTGAGCTCGCCA---AGCAACACGGCCCCTATGAGA 539686
Query 94970 CGTTCC-GCGGATCGCC-CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027
|||||| | | | | || ||| || |||||| | |||| ||| | ||| |
Sbjct 539687 CGTTCCAGGGTAGCCCCGCTT--CCCAAGGCATTCTGCAGTATGACATGTGGAACAAGGC 539744
Query 95028 GCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGTGTGA 95086
||| | | |||| |||||||| ||| || ||||| || | | ||||||||
Sbjct 539745 CCCCACTGACCTGTGGGACTGGGACAGC-CTGAAGGCTGAGGTCGCCCAGCACGGTGTCC 539803
Query 95087 AAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACA 95146
||| | ||||| || || |||||||| || ||||| || ||||| |||||| ||
Sbjct 539804 GCAACTCCCTGCTCGTTGCGCCCATGCCTACTGCCTCTACCAGTCAGATTCTTGGCTTCA 539863
Query 95147 ACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAAT 95206
|||||| ||||| || | ||| || ||| | ||| | || || | ||||| || |
Sbjct 539864 ACGAGTGCTTCGAGCCTTACACTTCGAACATTTACTCTCGCCGTGTCTTGGCCGGTGAGT 539923
Query 95207 TCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGAC 95265
||| ||| ||||| ||||| |||||| | || | || ||| ||||| |||
Sbjct 539924 TCCAGGTCGTCAACCCCTGGCTCCTGAAGGACCTGGTCGAC-CTCGGTCTGTGGTCGGAC 539982
Query 95266 AAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321
|| | ||||||| | |||| ||||||||||| ||||| | || || | ||
Sbjct 539983 CAGATGAAGAACCGCATCATTGCT----TCCAACGGCTCCATCCAGCAAATTCCCAACAT 540038
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
||||| |||||||||||||||||||||||||| |||||| || | |||||
Sbjct 540039 CCCGGATGACATCAAGGCGCTCTACAAGACCGTCTGGGAGCTCTCTCAGCG 540089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494716187298640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |