Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 154 1e-32
seq95 136 4e-27
seq125 111 2e-19
>seq12
Length=708323
Score = 154 bits (170), Expect = 1e-32
Identities = 798/1256 (64%), Gaps = 23/1256 (2%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| || || ||||| || ||||| || || | | || | || |||| |||
Sbjct 539938 GGTTGACGACCTGGAACTCACCGGCCAAGACACGGCGAGAGTAAATGTTCGAAGTGTAAG 539879
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| | ||||| ||| || || ||| || | || || |||||| ||| |
Sbjct 539878 GCTCGAAGCACTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAA 539819
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTG--CCAAT 153204
| | || || || || | |||||| | ||| || |||||| | ||| ||| |
Sbjct 539818 CGAGCAGGGAGTTGCGGACACCGTGCTGGGCGACC-TCAGCCTTCA--GGCTGTCCCAGT 539762
Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264
||||||| | | || | | |||||||||||| ||||| | | ||| | ||||
Sbjct 539761 CCCACAGGTCAGTGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGGGAAGCGG 539702
Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324
| || || ||||| ||| ||||| | | ||| || || | || |
Sbjct 539701 GGCTACCCTGGAACGTCTCATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAGGCAGTAA 539642
Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384
| || | | ||| ||||| ||| ||| || | ||||| || || |
Sbjct 539641 GAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCCTCAGGAGAAT 539582
Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444
|| | ||||| || || || || || ||||| ||||| | || ||| || | ||||
Sbjct 539581 CGAAGGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCAACAGCAATGG 539522
Query 153445 GTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAA 153504
| ||||| | |||||| | ||| || || | ||| ||||| ||| ||||| |
Sbjct 539521 GGCGATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGA 539462
Query 153505 TTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGG 153564
| ||||| ||||| || | ||||| ||| | | | ||| |||| ||| |||||
Sbjct 539461 TCTTGTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAA 539402
Query 153565 -TCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCC 153623
|| | | ||||| || | | | || | || || || || ||||| ||
Sbjct 539401 CTCCCTGC-TCGACATTGACAAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCG 539343
Query 153624 GTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACG 153683
||| || | | | |||||| || |||||| |||||||||| || ||| |
Sbjct 539342 ACCTCATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTG 539283
Query 153684 CCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 153743
|| | || | ||| ||||| ||||| ||||| ||| ||| | |||||| | || |
Sbjct 539282 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTG 539223
Query 153744 CCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC-AGGTCCTGCGCTCGCACCCGCTG 153802
|| |||||||| || | || | || | || || | ||| || || || ||
Sbjct 539222 CCAGTCTCGACCTGAGCCTCAAGAATGG-CGTACCAGAGCTTCTGGGCACGAACGGTCTC 539164
Query 153803 CCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCA 153862
||| || ||||| ||||||| |||||||||| ||| |||||||||||||||
Sbjct 539163 ACGACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGAC 539104
Query 153863 GTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGAC 153922
|||||| || || || |||| | || |||||||| | ||| | ||| | |||
Sbjct 539103 GTCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGAC 539044
Query 153923 GCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATC 153982
|| |||||| ||||| || | ||| || ||||| | ||||| || || || | |
Sbjct 539043 ACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAGC---GCGAAC 538987
Query 153983 CTC--CGCGCCCATGTTGCGTTTC--AGATTGAGCACGCTATAGATGTCGGCGTGCCAGG 154038
||| | || || | | || | || | || | ||| ||| ||||| ||||| |
Sbjct 538986 CTCTTCCTTTCCGTGGTTC-TTGCGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACG 538928
Query 154039 GTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCA 154095
| || | ||| | ||| | ||||| |||| || || ||||| ||||| | |||
Sbjct 538927 GCTCGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGG 538868
Query 154096 CCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC-GGTGCCGTTGGTCGAA 154154
| | |||||| | || || | ||| || |||||| |||| ||| |||||||| |
Sbjct 538867 CGGTGTTGTTGTACACACGGAGCATAGGAATGAGGCCG-TTGCTGGTACCGTTGGTGCCA 538809
Query 154155 TTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTAC 154214
|| | |||||| ||||| | | || || || | ||| || || ||| || |
Sbjct 538808 GCAATATAGCTGCCAGTAGCGCGAATACGGTGGACATTGAGGCCGATACCACCGGCGGTC 538749
Query 154215 TTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTC 154270
|| || || |||||| ||| || |||||| || || ||||| || ||
Sbjct 538748 TTGGAAATCATGGCGCAGGTCTTCAGGGTATCGTAGATACCCTCAATGCTGTCCTC 538693
>seq95
Length=147769
Score = 136 bits (150), Expect = 4e-27
Identities = 169/226 (75%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
||||| || | |||||| |||||||| | |||| || || || |||| || || |||
Sbjct 14345 GAGGCCGTAGATATCGAGAAGGAGTTCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGC 14286
Query 52674 ATGAACGCGCAGTCC-ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCA 52732
|||||||| || || ||| || ||||||| ||||| || || || || ||| |||||
Sbjct 14285 ATGAACGC-CAATCTTATGCGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGC 14227
Query 52733 GCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTT 52791
|| ||||| | | |||| || |||| | ||| || || || || ||| | ||||| |
Sbjct 14226 ACT-GGGCAACAAGAAGTTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCT 14168
Query 52792 CGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| | |||||||||||||| ||||||||||| || || || ||
Sbjct 14167 CGCTTAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTA 14122
>seq125
Length=94255
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||||||||||||| || ||||| ||| || || || |||||||
Sbjct 36580 GACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACCGTCTTCCAGCTGCTTACCGGCG 36521
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| |||||||| || ||||| || || || ||| || || |
Sbjct 36520 AAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTCACG 36461
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| || | || |||||||||| ||| | || || ||||| || || ||
Sbjct 36460 TTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTG 36401
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 36400 ACGAAGATCTGCAT 36387
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || || || | | |||||||| || |||||||||||
Sbjct 36385 CCACCACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAG 36326
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || |||||| || || ||||||| |||| |||||||| |||||||| ||
Sbjct 36325 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 36266
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | ||| || | || ||||||
Sbjct 36265 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36206
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| ||| | || || ||||| ||||| || || || ||||||||
Sbjct 36205 TCGAGCGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496255365480480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |