Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq125 82.4 7e-11
>seq125
Length=94255
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | | || ||||| || || || ||||| ||||| || |||||
Sbjct 35877 ATACCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 35818
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| ||||| || || || ||| | || | || |||||||||||
Sbjct 35817 GACAGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGG 35758
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || || || || || |||| || | || | ||| || || |||||
Sbjct 35757 GGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTATCCGACGACTC 35699
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316
||| || || || | || ||||||||
Sbjct 35698 GACCTCAAGGGTGATGGTCTTGCCGGT 35672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451996792854640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |