Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq125 82.4 7e-11 >seq125 Length=94255 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || ||||| || || || ||||| ||||| || ||||| Sbjct 35877 ATACCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 35818 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||| || || || ||| | || | || ||||||||||| Sbjct 35817 GACAGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGG 35758 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || || || || || |||| || | || | ||| || || ||||| Sbjct 35757 GGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTATCCGACGACTC 35699 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316 ||| || || || | || |||||||| Sbjct 35698 GACCTCAAGGGTGATGGTCTTGCCGGT 35672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451996792854640