Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq12 138 2e-27
>seq12
Length=708323
Score = 138 bits (152), Expect = 2e-27
Identities = 407/614 (66%), Gaps = 10/614 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTTCTCAGATAGTACATGC 203897
|| ||| || |||||||| |||| | || |||||| | | | | |||||||||||||
Sbjct 540285 CTGGTCGACAGTGAACTGGATGG-GAGCAGCGGCAGCCTGGGTACGGAGATAGTACATGC 540227
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| || || || ||| ||| | ||||||||| | | |||| || | |
Sbjct 540226 CAGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGGAGGTGATCTTGCCCATCGTAG 540167
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || |||||||||||| || ||||| || |||||| ||||| || || || ||
Sbjct 540166 GATCCTTCATGTGAATGTTGAGGGACTGCGACTGATCGATG-AAGGCACCACGGTCAGCA 540108
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075
||||| | || ||||| ||| || | |||||| || |||||| | | || || || |
Sbjct 540107 GCCATCTGGACGATGGTACGCTGAGAGAGCTCCCAGACGGTCTTGTAGAGCGCCT-TGAT 540049
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
|| | || | | | | | || ||| ||||||||| || || | | ||
Sbjct 540048 GTCATCCGGGATGT-TGGGAATTTGCTGGATGGAGCCGTTGGAAGCAATGATGCGGTTCT 539990
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194
|| ||| ||| ||||| || | || ||| ||| || || |||||||| ||
Sbjct 539989 TCATCTGGTCCGACCACAGACCGAGGTCGACCAGGTCCTTCAGGAGCCAGGGGTTGACGA 539930
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
||| || || |||| || || | || | | | | ||| ||| | || |||||
Sbjct 539929 CCTGGAACTCACCGGCCAAGACACGGCGAGAGTAAATGTTCGAAGTGTAAGGCTCGAAGC 539870
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
||||||| ||| | ||||||| ||| ||| || |||||||| || | ||||||||
Sbjct 539869 ACTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAACGAGCAGGG 539810
Query 204315 AGTTGCGCACACCGTATTTTTGGACC-CTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373
||||||| ||||||| | |||| | || |||||| | |||||| || ||
Sbjct 539809 AGTTGCGGACACCGTGCTGGGCGACCTCAGC-CTTCAGGCTGTCCCAGTCCCACAGGTCA 539751
Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433
|||| | | ||||||||| |||| | |||||||| | ||||| |||| |
Sbjct 539750 GTGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCTACCCTGG 539691
Query 204434 TACGTCGGATAAGG 204447
||||| ||| ||
Sbjct 539690 AACGTCTCATAGGG 539677
Score = 107 bits (118), Expect = 3e-18
Identities = 222/325 (68%), Gaps = 4/325 (1%)
Strand=Plus/Minus
Query 205072 GTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACA 205131
|||||| ||| | || || ||||| ||||| || || || || | ||||| ||
Sbjct 539133 GTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCA 539074
Query 205132 CATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCACA 205190
|||||||| ||| | | | || | || || | || ||| || || ||| ||||||||
Sbjct 539073 CATCAGAGTCCAGGTGCCGTTC-TGTTCGACACGCTTCATGAAGAGATCGGGGATCCACA 539015
Query 205191 GGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCA 205250
| |||||||||| ||||| || | || | || | ||| ||||||| | ||| |
Sbjct 539014 GAGCGTAAAACAGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAA 538955
Query 205251 GCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTC 205309
| |||| | | | ||||| ||||||||||| | | | ||| | ||| || || | |
Sbjct 538954 GG-AAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGAATGCACCGGGACGC 538896
Query 205310 TTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACC 205369
||||| ||||||||||| || ||| | | |||| | || || ||||| || |
Sbjct 538895 TTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATG 538836
Query 205370 AGACCGTTGGCGGTCCCGTTCGTGC 205394
|| |||||| ||| ||||| ||||
Sbjct 538835 AGGCCGTTGCTGGTACCGTTGGTGC 538811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795143928675040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |