Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq125 132 5e-26
seq63 131 2e-25
seq22 93.3 5e-14
>seq125
Length=94255
Score = 132 bits (146), Expect = 5e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||||| || | ||| |||||| ||||| |||||||| || |||||||| |
Sbjct 36374 ACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACC 36315
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || |||||||| |||||||| |||| ||||||||||| | ||| | | ||||||
Sbjct 36314 GTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTT 36255
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| ||||||| ||| | | | | || || |||||||| || | ||||||
Sbjct 36254 GTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGAT 36195
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || || || ||||| |||||
Sbjct 36194 AGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 131 bits (144), Expect = 2e-25
Identities = 134/175 (77%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| ||||| ||||||||||| || ||||| |||| || |||||||||||
Sbjct 36127 GTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 36068
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516
||||| ||||||||||||||||| | || | || |||||| ||| ||||||| ||||
Sbjct 36067 GCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTG 36008
Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | | | ||||| ||| || || || | |||||||| ||||| ||||
Sbjct 36007 ACATTGTCGATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 35953
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| |||| || ||||||||| || ||||||||||| || || || |
Sbjct 36602 ACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACC 36543
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || |||||||| |||||||| || | ||||||||||| | || | | ||||||
Sbjct 36542 GTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTT 36483
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||||| ||| | | | | || || |||||||| || | ||||||
Sbjct 36482 ATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGAT 36423
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || || || ||||| |||||
Sbjct 36422 AGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
Score = 100 bits (110), Expect = 3e-16
Identities = 125/169 (74%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || || ||||| | || || | |||||||||||||||
Sbjct 35839 CTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAA 35780
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||||||| | || | || ||||||||| |||||| |||||| |||
Sbjct 35779 GATAAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGT 35721
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || || ||| || || || | |||||||| ||||| ||
Sbjct 35720 TGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 35672
>seq63
Length=225829
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| || ||||| | || |||||||||||||||||||| |
Sbjct 138091 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138032
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||||||| |||||| |||||| |
Sbjct 138031 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 137972
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | |||||||| |||||||| || || || || |
Sbjct 137971 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 137912
Query 46584 AG 46585
||
Sbjct 137911 AG 137910
>seq22
Length=487495
Score = 93.3 bits (102), Expect = 5e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| | || || ||||||||||| |||||
Sbjct 64043 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 63984
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
||||| ||||||||||| | || | || |||||||||
Sbjct 63983 AATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 63945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565230387745680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |