Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq95 251 7e-62 seq63 127 2e-24 seq125 120 3e-22 >seq95 Length=147769 Score = 251 bits (278), Expect = 7e-62 Identities = 581/878 (66%), Gaps = 72/878 (8%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | || ||| | ||| || || ||||||||| Sbjct 14137 TTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTG 14196 Query 132685 GCTGTGTTGTAG---TGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||||| | |||| |||| ||| | || ||||| | ||| || |||||| Sbjct 14197 GTGGAGTTGTAGAACTTCTTGTTGCC---CAGTGCCACCAGCAGGCGGTCTGCGACGAAC 14253 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTC 132800 || ||||| || ||| | || || | | | || || ||| || || || || || Sbjct 14254 TCAATGTACTGGCGCATAAGATTGGCGTTCATG-CCGAGGAGAGCGACGGGAAGGGCATC 14312 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 ||||| || | |||||| | || || ||||||| ||| | | ||| | | Sbjct 14313 CGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGATCTTCTCGACGGCATCGGG 14372 Query 132861 GCTCGGCCGTTGCACCAAATG--CTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 ||| ||| || || ||| | ||||| || |||||| |||||| ||||| ||| Sbjct 14373 GCTGGGC--TTCGACTTGATGTGCGAGAACAGCAGGCAAGCGAAGTCGGTATGCATACCC 14430 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||| | || ||||| ||||| |||||| | |||||||||||||| || || || Sbjct 14431 TCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCATGAGGCCACGCTTCTTC 14490 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || |||| ||||| || ||||||| |||||||| ||||| ||||| Sbjct 14491 AGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTCGACAGCCGCAAAAGCG 14550 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 | ||||||| |||| || | | ||| | |||||||||||| ||||| |||||| Sbjct 14551 ATCAGGCGCGATGCGAAAGTCGAGTTCTTGTCGCAGATCCAGCGCAGGGCCCAGTCGGCC 14610 Query 133099 TTTTCTTTGACGCACGG-------------------------CATCG------------- 133120 || | |||| || || ||||| Sbjct 14611 TTCTTCTTGATACAAGGAACTATGAAGCGTCAGTGATCCATGCATCGCGTCGTGGAGTAT 14670 Query 133121 -------------TTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--A 133165 | ||||||||||| |||| | |||| | || || || ||| | Sbjct 14671 GGTAACTTACTGTTGTCGATGGCGTTGAACAG--GTAGTTGCGCTGCCTGGGCTCGCTAA 14728 Query 133166 CGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAA 133225 |||||||||||||||| || || | || ||||| | ||||||||| ||| || | Sbjct 14729 TGTAGGTGTCGATGAGGAGAGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGA 14788 Query 133226 AGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGA 133284 ||||||| ||||| || |||||| | ||| || || |||| |||||||||||| || Sbjct 14789 AGCCGTAGAAGCAGCGAGCCTCGGGGATCTGGACCTC-GGAGCTGAAACGCTCGACAAGG 14847 Query 133285 TTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGG 133344 || |||||||||||||| || ||||||||| || || || ||||| |||||| | Sbjct 14848 TTCTCGTTGACGATGCCATCAGAGGCGGCGAAGAAAGCGAGGACGTGGGAGATGAAGAAG 14907 Query 133345 CGCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCC 133401 ||||| | |||||| | ||| | ||||||| | ||||||||| || || | |||| Sbjct 14908 CGCTCATCGTCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCC 14967 Query 133402 TCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||| || || || || || || |||||||| Sbjct 14968 TCAGCCGTCCAGAAAGAGGCTTCAGCCTTCTTGTACAT 15005 >seq63 Length=225829 Score = 127 bits (140), Expect = 2e-24 Identities = 140/183 (77%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 137911 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 137970 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 137971 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCC 138028 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| | Sbjct 138029 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGA 138088 Query 38431 AGG 38433 ||| Sbjct 138089 AGG 138091 >seq125 Length=94255 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || ||||| |||| || || | | Sbjct 36387 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36446 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| || || ||||| |||||| | ||||| Sbjct 36447 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCA 36505 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || |||||||| |||| || || || ||||||||| Sbjct 36506 GCAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGACGGTCGTACGCTGTCCGACTACAA 36565 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||| |||||||| |||| ||||| |||||||| ||| | | || |||| Sbjct 36566 CATTCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGTGGCC 36615 Score = 109 bits (120), Expect = 5e-19 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || ||||| |||| || || | | Sbjct 36159 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36218 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 || | | | | |||| | || || |||| ||||| ||||| || ||||||| ||| Sbjct 36219 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGACAAGGAGGGTAT-CCCGCCGGACC 36276 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| || || ||||| || |||| ||||| ||| ||||||| Sbjct 36277 AGCAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCGGACTACA 36336 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || || || |||||||||||| Sbjct 36337 ACATCCAGAAGGAGTCCACACTCCACTTGGTGCTGCGT 36374 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || |||||| | | || | | | | |||| | || Sbjct 35670 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACCATCGACAACG--TCAA 35727 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| ||||| || || |||||| | ||||| ||||| || || | ||| || Sbjct 35728 GAGCAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCCTTATCTTCGCCGG 35787 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||| |||| || | |||||||| || ||||||||||| ||||| |||| || Sbjct 35788 CAAGCAGTTGGAAGATGGCCGCACCCTGTCGGATTACAACATCCAGAAGGAGTCGACCCT 35847 Query 38444 GCATTTGGTGCTGCG 38458 ||| | || || || Sbjct 35848 TCATCTCGTCCTCCG 35862 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| ||||||||| |||| |||||| | | |||| | | | | | || Sbjct 35955 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCTGACACCATCGACAATGTCAAGTCG 36014 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| || || ||||| || || | ||||| ||||| | || | ||| ||||| Sbjct 36015 AAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 36074 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 ||||| || |||| |||||||| ||||||||||||||| ||||| Sbjct 36075 CAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGA 36121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500165710050560