Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq95 251 7e-62
seq63 127 2e-24
seq125 120 3e-22
>seq95
Length=147769
Score = 251 bits (278), Expect = 7e-62
Identities = 581/878 (66%), Gaps = 72/878 (8%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | || ||| | ||| || || |||||||||
Sbjct 14137 TTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTG 14196
Query 132685 GCTGTGTTGTAG---TGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | ||||||| | |||| |||| ||| | || ||||| | ||| || ||||||
Sbjct 14197 GTGGAGTTGTAGAACTTCTTGTTGCC---CAGTGCCACCAGCAGGCGGTCTGCGACGAAC 14253
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTC 132800
|| ||||| || ||| | || || | | | || || ||| || || || || ||
Sbjct 14254 TCAATGTACTGGCGCATAAGATTGGCGTTCATG-CCGAGGAGAGCGACGGGAAGGGCATC 14312
Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860
||||| || | |||||| | || || ||||||| ||| | | ||| | |
Sbjct 14313 CGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGATCTTCTCGACGGCATCGGG 14372
Query 132861 GCTCGGCCGTTGCACCAAATG--CTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918
||| ||| || || ||| | ||||| || |||||| |||||| ||||| |||
Sbjct 14373 GCTGGGC--TTCGACTTGATGTGCGAGAACAGCAGGCAAGCGAAGTCGGTATGCATACCC 14430
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
||||| | || ||||| ||||| |||||| | |||||||||||||| || || ||
Sbjct 14431 TCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCATGAGGCCACGCTTCTTC 14490
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
||||| || |||| ||||| || ||||||| |||||||| ||||| |||||
Sbjct 14491 AGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTCGACAGCCGCAAAAGCG 14550
Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
| ||||||| |||| || | | ||| | |||||||||||| ||||| ||||||
Sbjct 14551 ATCAGGCGCGATGCGAAAGTCGAGTTCTTGTCGCAGATCCAGCGCAGGGCCCAGTCGGCC 14610
Query 133099 TTTTCTTTGACGCACGG-------------------------CATCG------------- 133120
|| | |||| || || |||||
Sbjct 14611 TTCTTCTTGATACAAGGAACTATGAAGCGTCAGTGATCCATGCATCGCGTCGTGGAGTAT 14670
Query 133121 -------------TTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--A 133165
| ||||||||||| |||| | |||| | || || || ||| |
Sbjct 14671 GGTAACTTACTGTTGTCGATGGCGTTGAACAG--GTAGTTGCGCTGCCTGGGCTCGCTAA 14728
Query 133166 CGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAA 133225
|||||||||||||||| || || | || ||||| | ||||||||| ||| || |
Sbjct 14729 TGTAGGTGTCGATGAGGAGAGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGA 14788
Query 133226 AGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGA 133284
||||||| ||||| || |||||| | ||| || || |||| |||||||||||| ||
Sbjct 14789 AGCCGTAGAAGCAGCGAGCCTCGGGGATCTGGACCTC-GGAGCTGAAACGCTCGACAAGG 14847
Query 133285 TTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGG 133344
|| |||||||||||||| || ||||||||| || || || ||||| |||||| |
Sbjct 14848 TTCTCGTTGACGATGCCATCAGAGGCGGCGAAGAAAGCGAGGACGTGGGAGATGAAGAAG 14907
Query 133345 CGCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCC 133401
||||| | |||||| | ||| | ||||||| | ||||||||| || || | ||||
Sbjct 14908 CGCTCATCGTCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCC 14967
Query 133402 TCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| | ||||| || || || || || || ||||||||
Sbjct 14968 TCAGCCGTCCAGAAAGAGGCTTCAGCCTTCTTGTACAT 15005
>seq63
Length=225829
Score = 127 bits (140), Expect = 2e-24
Identities = 140/183 (77%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | |
Sbjct 137911 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 137970
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| || | | |||| || |||| ||||| ||||| |||||| | ||||| ||||| |
Sbjct 137971 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCC 138028
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| |
Sbjct 138029 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGA 138088
Query 38431 AGG 38433
|||
Sbjct 138089 AGG 138091
>seq125
Length=94255
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || || ||||| |||| || || | |
Sbjct 36387 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36446
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || |||| || || ||||| |||||| | |||||
Sbjct 36447 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCA 36505
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || |||||||| |||| || || || |||||||||
Sbjct 36506 GCAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGACGGTCGTACGCTGTCCGACTACAA 36565
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||| |||||||| |||| ||||| |||||||| ||| | | || ||||
Sbjct 36566 CATTCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGTGGCC 36615
Score = 109 bits (120), Expect = 5e-19
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || || ||||| |||| || || | |
Sbjct 36159 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36218
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361
|| | | | | |||| | || || |||| ||||| ||||| || ||||||| |||
Sbjct 36219 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGACAAGGAGGGTAT-CCCGCCGGACC 36276
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| || || ||||| || |||| ||||| ||| |||||||
Sbjct 36277 AGCAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCGGACTACA 36336
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| | || || || ||||||||||||
Sbjct 36337 ACATCCAGAAGGAGTCCACACTCCACTTGGTGCTGCGT 36374
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||| ||||||||| | || |||||| | | || | | | | |||| | ||
Sbjct 35670 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACCATCGACAACG--TCAA 35727
Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383
|| || |||| ||||| || || |||||| | ||||| ||||| || || | ||| ||
Sbjct 35728 GAGCAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCCTTATCTTCGCCGG 35787
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443
||| ||| |||| || | |||||||| || ||||||||||| ||||| |||| ||
Sbjct 35788 CAAGCAGTTGGAAGATGGCCGCACCCTGTCGGATTACAACATCCAGAAGGAGTCGACCCT 35847
Query 38444 GCATTTGGTGCTGCG 38458
||| | || || ||
Sbjct 35848 TCATCTCGTCCTCCG 35862
Score = 89.7 bits (98), Expect = 5e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327
|| ||||| ||||||||| |||| |||||| | | |||| | | | | | ||
Sbjct 35955 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCTGACACCATCGACAATGTCAAGTCG 36014
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| || || ||||| || || | ||||| ||||| | || | ||| |||||
Sbjct 36015 AAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 36074
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
||||| || |||| |||||||| ||||||||||||||| |||||
Sbjct 36075 CAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGA 36121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500165710050560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |