Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq95 84.2 3e-11 >seq3 Length=900425 Score = 113 bits (124), Expect = 5e-20 Identities = 279/411 (68%), Gaps = 13/411 (3%) Strand=Plus/Plus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 |||||||||||| || || | ||||| | || || | |||| | ||| ||| | || Sbjct 850609 ATCGAAACGACCAGGACGCATAAGAGCCTTGTCGAGTACATCGGGTCTGTTAGTACCTGC 850668 Query 11565 AATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 | ||| || | || | || | ||| |||||||||||| || || | | || ||| Sbjct 850669 CAGGACGACGA--CCTGCTCCGACGTGTTGAAACCGTCCATCTCCGTCAATATTTGATTG 850726 Query 11623 ATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTT--CTTACCG 11679 | || ||| | |||||||||| | || | ||| | | ||| ||| ||| Sbjct 850727 AGAGTACTTTCTCTCTCATCGTTGCCACCGCCGAAGCTTTGCTTAGCTCTTGACTTGCCG 850786 Query 11680 ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGC-CTGTTCGAA 11738 | |||||| || ||||| ||||| | ||| || || ||| | || ||||| || Sbjct 850787 ATAGCGTCGATTTCATCAATGAAGATGATGCAGGG--GGTACTCTTCCGCGCTGTTGCAA 850844 Query 11739 A-AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC-A 11796 | | || ||||| | | |||||||| ||||||||||| ||||| | | | | Sbjct 850845 ACAAATCTCGTACTCTGGAGGGACCAACACCGACGAACATCTCCACGAACTCGGAGCCGC 850904 Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 ||| ||||| |||||| || | || ||||| || |||| ||| || || ||||| Sbjct 850905 TAACGCTGAA-GAAGGGCACCTGGGATTCACCGGCAGTGGCCTTAGCAAGCAGCGTCTTG 850963 Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 || |||||||| | ||||| ||| | ||||||||| || || ||||||||| Sbjct 850964 CCAGTACCAGGAGGACCAGAGAGGATGGCGCCACGAGGAATTTTGGCACCA 851014 >seq95 Length=147769 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/186 (71%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || |||||||||||||| ||| ||| || || |||||||| || | ||| Sbjct 14428 CCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCATGAGGCCACGCTTC 14487 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| | || |||| |||||||| ||||| ||| || ||| Sbjct 14488 TTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTCGACAGCCGCAAAA 14547 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGCCCAGTT 119689 |||| || ||| || ||| |||||| |||||| || ||| || ||||||| Sbjct 14548 GCGATCAGGCGCGATGCGAAA-GTCGAGTTCTTGTCGCAGATCCAGCGCAGGGCCCAGTC 14606 Query 119690 GGCCTT 119695 |||||| Sbjct 14607 GGCCTT 14612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588967651265200