Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 5e-20
seq95 84.2 3e-11
>seq3
Length=900425
Score = 113 bits (124), Expect = 5e-20
Identities = 279/411 (68%), Gaps = 13/411 (3%)
Strand=Plus/Plus
Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564
|||||||||||| || || | ||||| | || || | |||| | ||| ||| | ||
Sbjct 850609 ATCGAAACGACCAGGACGCATAAGAGCCTTGTCGAGTACATCGGGTCTGTTAGTACCTGC 850668
Query 11565 AATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622
| ||| || | || | || | ||| |||||||||||| || || | | || |||
Sbjct 850669 CAGGACGACGA--CCTGCTCCGACGTGTTGAAACCGTCCATCTCCGTCAATATTTGATTG 850726
Query 11623 ATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTT--CTTACCG 11679
| || ||| | |||||||||| | || | ||| | | ||| ||| |||
Sbjct 850727 AGAGTACTTTCTCTCTCATCGTTGCCACCGCCGAAGCTTTGCTTAGCTCTTGACTTGCCG 850786
Query 11680 ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGC-CTGTTCGAA 11738
| |||||| || ||||| ||||| | ||| || || ||| | || ||||| ||
Sbjct 850787 ATAGCGTCGATTTCATCAATGAAGATGATGCAGGG--GGTACTCTTCCGCGCTGTTGCAA 850844
Query 11739 A-AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC-A 11796
| | || ||||| | | |||||||| ||||||||||| ||||| | | | |
Sbjct 850845 ACAAATCTCGTACTCTGGAGGGACCAACACCGACGAACATCTCCACGAACTCGGAGCCGC 850904
Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856
||| ||||| |||||| || | || ||||| || |||| ||| || || |||||
Sbjct 850905 TAACGCTGAA-GAAGGGCACCTGGGATTCACCGGCAGTGGCCTTAGCAAGCAGCGTCTTG 850963
Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907
|| |||||||| | ||||| ||| | ||||||||| || || |||||||||
Sbjct 850964 CCAGTACCAGGAGGACCAGAGAGGATGGCGCCACGAGGAATTTTGGCACCA 851014
>seq95
Length=147769
Score = 84.2 bits (92), Expect = 3e-11
Identities = 132/186 (71%), Gaps = 5/186 (3%)
Strand=Plus/Plus
Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573
|| || || |||||||||||||| ||| ||| || || |||||||| || | |||
Sbjct 14428 CCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCATGAGGCCACGCTTC 14487
Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633
|| ||||| ||||||| | || |||| |||||||| ||||| ||| || |||
Sbjct 14488 TTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTCGACAGCCGCAAAA 14547
Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGCCCAGTT 119689
|||| || ||| || ||| |||||| |||||| || ||| || |||||||
Sbjct 14548 GCGATCAGGCGCGATGCGAAA-GTCGAGTTCTTGTCGCAGATCCAGCGCAGGGCCCAGTC 14606
Query 119690 GGCCTT 119695
||||||
Sbjct 14607 GGCCTT 14612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588967651265200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |