Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq12 114 2e-20 seq95 91.5 2e-13 seq3 86.0 7e-12 >seq12 Length=708323 Score = 114 bits (126), Expect = 2e-20 Identities = 577/911 (63%), Gaps = 25/911 (3%) Strand=Plus/Minus Query 106096 CCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGA 106155 |||||| ||| | || || | |||||||| | ||| ||||| || |||||||||| Sbjct 539736 CCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCTACCCTGGAACGTCTCATAGGG 539677 Query 106156 ACCTTGG-GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAA 106214 || || |||| || | ||| | || || | ||||| || ||||| || | Sbjct 539676 GCCGTGTTGCTTG-GCGAGCTCAATGGAGGCAGTAAGAGCAGCGTGGTAGATGGTCTCGA 539618 Query 106215 AGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAA 106269 |||| || || | | |||||| ||| ||||| || | || || | || | Sbjct 539617 AGATCTGAATGTTGAGGTGCTTGGCCTCAGGAGAATCGAAGGGCATACGAAGAGCCAGGA 539558 Query 106270 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 106329 || |||| |||||||| | ||||| | | |||| || | || ||||| || Sbjct 539557 AAG-----CATCGGCGAGACCGTTGACACCAACAGCAATGGGGCGATGGCGCATGTTGCT 539503 Query 106330 CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGT 106389 | | | || | ||||| || || |||| |||| ||| || || ||| Sbjct 539502 CCTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCTTGTTCAGGTTCTTGAC 539443 Query 106390 AACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA-AAAGTGCGAGTCTCTTCATTGA 106448 | | | |||| |||||||| || | | ||| ||| | | | ||| |||||| Sbjct 539442 GAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTCCCTG-CTCGACATTGA 539384 Query 106449 CATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGT 106508 || | | ||||| || | ||||| | ||||| ||||| |||||| | |||| Sbjct 539383 CAAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTGT 539324 Query 106509 ACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTAC 106568 |||| | ||| || || | |||||| || || || || | ||||| ||||| | Sbjct 539323 ACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGC 539264 Query 106569 TCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACT 106628 |||| |||||| |||||||| |||||| |||| | || ||||| ||| | || Sbjct 539263 TCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCCT 539204 Query 106629 TGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCC 106687 ||||| || | ||| | | || | ||| | || | | |||| |||||| | Sbjct 539203 CAAGAATGGCGTACCAGAGCTTCTG-GGCACGAACGGTCTCACGACCCCGACCCTCCTTC 539145 Query 106688 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 106747 ||||||| ||| || || || ||||| || || |||||| ||||| || | Sbjct 539144 TCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCAC 539085 Query 106748 TTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCT 106807 | || || || | |||| ||| || || || || ||||||||||| || || Sbjct 539084 TCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACGCTTCATGAAGAGATCG 539025 Query 106808 GGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGT 106867 || |||||||| | |||| || || | | ||| ||||||| | || ||||| Sbjct 539024 GGGATCCACAGAGCGTAAAACAGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTCTTG 538965 Query 106868 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 106927 || | |||||||| | || ||| || ||||| ||||| || || | |||| || Sbjct 538964 CGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGA---AT 538908 Query 106928 CCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 106981 | ||||| ||| | || | |||||||| || ||| ||| | || || Sbjct 538907 GCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGG 538848 Query 106982 AGCATTGGAAT 106992 ||||| ||||| Sbjct 538847 AGCATAGGAAT 538837 >seq95 Length=147769 Score = 91.5 bits (100), Expect = 2e-13 Identities = 332/512 (65%), Gaps = 6/512 (1%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 14122 TAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTCCATG 14181 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA-AATGGGTGGCACCCCAACTTGTTTGAGGAGACG 117104 ||||| || || || | | ||| | || | | |||| | || || || Sbjct 14182 AAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTGCCCAG-TGCCACCAGCAGGCG 14240 Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164 || | || |||||||||||| | ||| | | |||||| |||| |||| Sbjct 14241 GTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGCGTTCATGCCGAGGAGAGCGAC 14300 Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224 || || || ||| || |||| | ||||| || || || ||||| | | ||| | Sbjct 14301 GGGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGATCTTCTC 14360 Query 117225 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAACTCCT 117283 || | |||| |||| || || | || | ||| ||| || || || Sbjct 14361 GACGGCATCGGGGCTGGG-CTTCGACTTGATGTGCGAGAACAGCAGGCAAGCGAAGTCGG 14419 Query 117284 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGAC 117343 || | |||||| || || || || || || || ||||| || || |||||||| | Sbjct 14420 TATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCATGAGGC 14479 Query 117344 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 | |||||||||| ||| | || | ||| || || ||||||||||||||| ||| Sbjct 14480 CACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTCGACAG 14539 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATT 117462 |||||| || | |||||| ||||| | |||| |||| || | ||| || Sbjct 14540 CCGCAAAAGCGATCAGGCGCGATGCGAAAG-TCGAGTTCTTGTCGCAGATCCAGCGCAGG 14598 Query 117463 GCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||||| | |||||||||| ||||| || || Sbjct 14599 GCCCAGTCGGCCTTCTTCTTGATACAAGGAAC 14630 >seq3 Length=900425 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 || || || ||||||||||||| || || || | | | || || || |||| | | Sbjct 850790 GCGTCGATTTCATCAATGAAGATGATGCAGGGGGTACTCTTCCGCGCTGTTGCAAACAAA 850849 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACA 9490 || || || || || || ||||| || ||||||||||| || | | | || ||| Sbjct 850850 TCTCGTACTCTGGAGGGACCAACACCGACGAACATCTCCACGAACTCGGAGCCGCTAACG 850909 Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550 | || |||||| || | |||||||| ||| |||| || || || ||||| || || Sbjct 850910 CT-GAAGAAGGGCACCTGGGATTCACCGGCAGTGGCCTTAGCAAGCAGCGTCTTGCCAGT 850968 Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596 ||| || ||| | ||||| ||| || || ||||| ||||| ||| Sbjct 850969 ACCAGGAGGACCAGAGAGGATGGCGCCACGAGGAATTTTGGCACCA 851014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589972437022160