Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq12 114 2e-20
seq95 91.5 2e-13
seq3 86.0 7e-12
>seq12
Length=708323
Score = 114 bits (126), Expect = 2e-20
Identities = 577/911 (63%), Gaps = 25/911 (3%)
Strand=Plus/Minus
Query 106096 CCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGA 106155
|||||| ||| | || || | |||||||| | ||| ||||| || ||||||||||
Sbjct 539736 CCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCTACCCTGGAACGTCTCATAGGG 539677
Query 106156 ACCTTGG-GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAA 106214
|| || |||| || | ||| | || || | ||||| || ||||| || |
Sbjct 539676 GCCGTGTTGCTTG-GCGAGCTCAATGGAGGCAGTAAGAGCAGCGTGGTAGATGGTCTCGA 539618
Query 106215 AGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAA 106269
|||| || || | | |||||| ||| ||||| || | || || | || |
Sbjct 539617 AGATCTGAATGTTGAGGTGCTTGGCCTCAGGAGAATCGAAGGGCATACGAAGAGCCAGGA 539558
Query 106270 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 106329
|| |||| |||||||| | ||||| | | |||| || | || ||||| ||
Sbjct 539557 AAG-----CATCGGCGAGACCGTTGACACCAACAGCAATGGGGCGATGGCGCATGTTGCT 539503
Query 106330 CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGT 106389
| | | || | ||||| || || |||| |||| ||| || || |||
Sbjct 539502 CCTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCTTGTTCAGGTTCTTGAC 539443
Query 106390 AACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA-AAAGTGCGAGTCTCTTCATTGA 106448
| | | |||| |||||||| || | | ||| ||| | | | ||| ||||||
Sbjct 539442 GAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTCCCTG-CTCGACATTGA 539384
Query 106449 CATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGT 106508
|| | | ||||| || | ||||| | ||||| ||||| |||||| | ||||
Sbjct 539383 CAAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTGT 539324
Query 106509 ACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTAC 106568
|||| | ||| || || | |||||| || || || || | ||||| ||||| |
Sbjct 539323 ACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGC 539264
Query 106569 TCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACT 106628
|||| |||||| |||||||| |||||| |||| | || ||||| ||| | ||
Sbjct 539263 TCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCCT 539204
Query 106629 TGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCC 106687
||||| || | ||| | | || | ||| | || | | |||| |||||| |
Sbjct 539203 CAAGAATGGCGTACCAGAGCTTCTG-GGCACGAACGGTCTCACGACCCCGACCCTCCTTC 539145
Query 106688 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 106747
||||||| ||| || || || ||||| || || |||||| ||||| || |
Sbjct 539144 TCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCAC 539085
Query 106748 TTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCT 106807
| || || || | |||| ||| || || || || ||||||||||| || ||
Sbjct 539084 TCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACGCTTCATGAAGAGATCG 539025
Query 106808 GGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGT 106867
|| |||||||| | |||| || || | | ||| ||||||| | || |||||
Sbjct 539024 GGGATCCACAGAGCGTAAAACAGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTCTTG 538965
Query 106868 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 106927
|| | |||||||| | || ||| || ||||| ||||| || || | |||| ||
Sbjct 538964 CGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGA---AT 538908
Query 106928 CCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 106981
| ||||| ||| | || | |||||||| || ||| ||| | || ||
Sbjct 538907 GCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGG 538848
Query 106982 AGCATTGGAAT 106992
||||| |||||
Sbjct 538847 AGCATAGGAAT 538837
>seq95
Length=147769
Score = 91.5 bits (100), Expect = 2e-13
Identities = 332/512 (65%), Gaps = 6/512 (1%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| |||||||| |||||||||||||| || | ||| ||||| |||||
Sbjct 14122 TAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTCCATG 14181
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA-AATGGGTGGCACCCCAACTTGTTTGAGGAGACG 117104
||||| || || || | | ||| | || | | |||| | || || ||
Sbjct 14182 AAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTGCCCAG-TGCCACCAGCAGGCG 14240
Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164
|| | || |||||||||||| | ||| | | |||||| |||| ||||
Sbjct 14241 GTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGCGTTCATGCCGAGGAGAGCGAC 14300
Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224
|| || || ||| || |||| | ||||| || || || ||||| | | ||| |
Sbjct 14301 GGGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGATCTTCTC 14360
Query 117225 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAACTCCT 117283
|| | |||| |||| || || | || | ||| ||| || || ||
Sbjct 14361 GACGGCATCGGGGCTGGG-CTTCGACTTGATGTGCGAGAACAGCAGGCAAGCGAAGTCGG 14419
Query 117284 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGAC 117343
|| | |||||| || || || || || || || ||||| || || |||||||| |
Sbjct 14420 TATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCATGAGGC 14479
Query 117344 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403
| |||||||||| ||| | || | ||| || || ||||||||||||||| |||
Sbjct 14480 CACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTCGACAG 14539
Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATT 117462
|||||| || | |||||| ||||| | |||| |||| || | ||| ||
Sbjct 14540 CCGCAAAAGCGATCAGGCGCGATGCGAAAG-TCGAGTTCTTGTCGCAGATCCAGCGCAGG 14598
Query 117463 GCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494
||||| | |||||||||| ||||| || ||
Sbjct 14599 GCCCAGTCGGCCTTCTTCTTGATACAAGGAAC 14630
>seq3
Length=900425
Score = 86.0 bits (94), Expect = 7e-12
Identities = 156/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
|| || || ||||||||||||| || || || | | | || || || |||| | |
Sbjct 850790 GCGTCGATTTCATCAATGAAGATGATGCAGGGGGTACTCTTCCGCGCTGTTGCAAACAAA 850849
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACA 9490
|| || || || || || ||||| || ||||||||||| || | | | || |||
Sbjct 850850 TCTCGTACTCTGGAGGGACCAACACCGACGAACATCTCCACGAACTCGGAGCCGCTAACG 850909
Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550
| || |||||| || | |||||||| ||| |||| || || || ||||| || ||
Sbjct 850910 CT-GAAGAAGGGCACCTGGGATTCACCGGCAGTGGCCTTAGCAAGCAGCGTCTTGCCAGT 850968
Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596
||| || ||| | ||||| ||| || || ||||| ||||| |||
Sbjct 850969 ACCAGGAGGACCAGAGAGGATGGCGCCACGAGGAATTTTGGCACCA 851014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589972437022160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |