Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 2e-12
>seq1
Length=1260241
Score = 87.8 bits (96), Expect = 2e-12
Identities = 155/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 153833
|| ||| | ||| | || || || || ||||| ||||| |||||||| | ||||||
Sbjct 274069 TTCGGTGTGCCTTTTGGGTACGGTGGGCCTCACGCTGCCTTCTTTGCTGTGAGCGACAAG 274010
Query 153834 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAA 153893
| ||| | ||||| ||||| | | | || | || || || ||| | |
Sbjct 274009 CACAAGCGCAAGATGCCTGGTCGTTTGATTGGACTTTCCAAGGACCGTCTGGGTGACAGT 273950
Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953
|| ||| | || || || |||||||| ||||||||| | ||||| || || || ||
Sbjct 273949 GCGGCAAGACTGGCTCTGCAAACTAGAGAACAGCATATCCGCAGAGAGAAGGCTACTAGC 273890
Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCT 153999
||||||||||| || ||||| || ||||||| ||| || |||||
Sbjct 273889 AACATCTGCACTGCCCAGGCGCTTTTGGCTAACATGAGTGCATTCT 273844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579204589658560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |