Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=1260241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 153833 || ||| | ||| | || || || || ||||| ||||| |||||||| | |||||| Sbjct 274069 TTCGGTGTGCCTTTTGGGTACGGTGGGCCTCACGCTGCCTTCTTTGCTGTGAGCGACAAG 274010 Query 153834 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAA 153893 | ||| | ||||| ||||| | | | || | || || || ||| | | Sbjct 274009 CACAAGCGCAAGATGCCTGGTCGTTTGATTGGACTTTCCAAGGACCGTCTGGGTGACAGT 273950 Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953 || ||| | || || || |||||||| ||||||||| | ||||| || || || || Sbjct 273949 GCGGCAAGACTGGCTCTGCAAACTAGAGAACAGCATATCCGCAGAGAGAAGGCTACTAGC 273890 Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCT 153999 ||||||||||| || ||||| || ||||||| ||| || ||||| Sbjct 273889 AACATCTGCACTGCCCAGGCGCTTTTGGCTAACATGAGTGCATTCT 273844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579204589658560