Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq125 105 5e-18
>seq125
Length=94255
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||||| || || ||| ||| || || || ||||| || || ||| | |||
Sbjct 36376 AGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGA 36317
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||||||||| || ||||| ||||| || |||| || | ||||||
Sbjct 36316 CCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCC 36257
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | | || || | |||||||| | |||
Sbjct 36256 TTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTG 36197
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| || | ||| || || || ||||||||
Sbjct 36196 ATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || || || ||| |||||||| ||||| || || || | |||
Sbjct 36604 AGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGA 36545
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| |||| |||||||||||| || || || ||||| || |||| ||||| ||||||
Sbjct 36544 CCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCC 36485
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || ||||| || || | | | | || || | |||||||| | |||
Sbjct 36484 TTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTG 36425
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| || | || || || || ||||||||
Sbjct 36424 ATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380932335204282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |