Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12 127 2e-24 seq95 91.5 2e-13 >seq12 Length=708323 Score = 127 bits (140), Expect = 2e-24 Identities = 581/912 (64%), Gaps = 27/912 (3%) Strand=Plus/Plus Query 75530 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGG------G 75583 ||||| ||||| || || | ||| ||| || |||||||| | || | || | Sbjct 538837 ATTCCTATGCTCCGTGTGTACAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAG 538896 Query 75584 CGTCGCAAGGGGTCCAT-CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTT 75642 |||| | ||| ||| ||| | ||| | || || |||||||||||| || | || Sbjct 538897 CGTCCC----GGTGCATTCGCCATTTACCTCGAGCCGTGGCATGCCGATGTCTTCAGCTT 538952 Query 75643 CCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATC 75702 |||||| | || ||||| || | ||||||| ||| | | || || |||| | Sbjct 538953 CCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGGTTCGCGCTCGTGACCTGTTTTACGC 539012 Query 75703 CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTT 75762 |||||||| || || || ||||||||||| || || || || ||| |||| | Sbjct 539013 TCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAACAGAACGGCACCTGGACTCTGAT 539072 Query 75763 CTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTA 75822 || || || || || ||||| |||||| || || ||||| || || || || Sbjct 539073 GTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGACGAGTTCGAGGCTCTGTA 539132 Query 75823 CACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGA 75881 | |||| || |||||||| | | || ||| || | ||| | || | | ||| Sbjct 539133 CGAGCAGTACGAGAAGGAGGGTCGGGGTCGTGAGACCGTTCGTGCC-CAGAAGCTCTGGT 539191 Query 75882 AGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTT 75941 | || ||||| | | ||| |||||||| | || | ||||| |||||||| | Sbjct 539192 ACGCCATTCTTGAGGCTCAGGTCGAGACTGGCAACCCCTTCATGCTGTACAAGGACCACT 539251 Query 75942 GTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGG 76001 | ||| ||||| ||||| ||||| | || || ||| ||||| || || ||| | Sbjct 539252 GCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATCCGCAGCTCCAACCTCTGCTGCG 539311 Query 76002 AAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCC 76061 | ||| | |||||||| | |||||| ||||| ||||| | ||||| | || | Sbjct 539312 AGATTGTCGAGTACACTGCCCCTGATGAGGTCGCTGTCTGCAACCTTGCATCCCTGGCAC 539371 Query 76062 TTCCAAAGTATGTCAATGAAGAGACTCGCACTTT-TGATTATGAAAAACTTCATGAAATC 76120 |||| | | |||||||| ||| | | | ||| ||| | | || |||||||| || Sbjct 539372 TTCCTACCTTTGTCAATGTCGAG-CAGGGAGTTTATGACTTCAAGAAGCTTCATGATGTC 539430 Query 76121 ACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAG 76180 || | | | ||| || || ||| |||| |||| || || ||||| | Sbjct 539431 ACTCAAGTGCTCGTCAAGAACCTGAACAAGATCATCGACATCAACCACTACCCCGTGCCG 539490 Query 76181 ACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCG 76240 || | | | || ||||| || | || |||| | | ||||| | |||||||| Sbjct 539491 GAGGCTAGGAGGAGCAACATGCGCCATCGCCCCATTGCTGTTGGTGTCAACGGTCTCGCC 539550 Query 76241 GATGTATTTATTTTGTGCCGCTACG-----CATTTGATTCAGATGAAGCCAAGGAGATGA 76295 |||| ||| || | || || | || ||||| ||| |||||| | | | Sbjct 539551 GATG-----CTTTCCTGGCTCTTCGTATGCCCTTCGATTCTCCTGAGGCCAAGCACCTCA 539605 Query 76296 ATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTG 76355 | || ||||| || ||||| || ||||| | || || ||| | || Sbjct 539606 ACATTCAGATCTTCGAGACCATCTACCACGCTGCTCTTACTGCCTCCATTGAGCTCGC-C 539664 Query 76356 AAGC-CCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAG 76414 |||| || || |||||||||| || ||||| ||||| |||||||| | || ||| Sbjct 539665 AAGCAACACGGCCCCTATGAGACGTTCCAGGGTAGCCCCGCTTCCCAAGGCATTCTGCAG 539724 Query 76415 TTTGATATGTGG 76426 | ||| |||||| Sbjct 539725 TATGACATGTGG 539736 >seq95 Length=147769 Score = 91.5 bits (100), Expect = 2e-13 Identities = 332/512 (65%), Gaps = 6/512 (1%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCG 65066 || || ||||| |||||||||| | ||||| || ||| | || |||| |||| Sbjct 14630 GTTCCTTGTATCAAGAAGAAGGCCGACTGGGCCCTGCGCTGGATCTGCGACAAGAACTCG 14571 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 | ||||| |||||| | || |||||| ||| ||||||||||||||| || || Sbjct 14570 A-CTTTCGCATCGCGCCTGATCGCTTTTGCGGCTGTCGAGGGTATCTTCTTCAGTGGATC 14512 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | || | ||| |||||||||| || |||||||| || || ||||| || Sbjct 14511 CTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAA 14452 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-A 65245 || || || || || || |||||| | || || || || ||| ||| | | Sbjct 14451 CGAGCTCATCTCTCGTGACGAGGGTATGCATACCGACTTCGCTTGCCTGCTGTTCTCGCA 14392 Query 65246 CTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | | || || |||| |||| | || | ||| | | ||||| || || | Sbjct 14391 CATCAAGTCGAAG-CCCAGCCCCGATGCCGTCGAGAAGATCATCACCGAGGCCGTAGATA 14333 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 | ||||| | |||| || ||| || || || |||| |||| |||||| | | Sbjct 14332 TCGAGAAGGAGTTCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGCCAATC 14273 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC 65425 ||| | |||||||||||| || | || || || || | |||| | | Sbjct 14272 TTATGCGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCA-CTGGGCAACAAG 14214 Query 65426 CCATT-TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAG 65484 || | ||| | | || || || ||||| ||||| ||||| ||| | || ||| Sbjct 14213 AAGTTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAG 14154 Query 65485 ACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||||||||| |||||||| ||||| ||||| Sbjct 14153 ACCAACTTCTTCGAGAAGCGCGTTGGTGACTA 14122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561143625920