Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq125 248 1e-60 seq84 134 2e-26 seq63 131 2e-25 seq41 113 6e-20 seq27 107 3e-18 seq3 89.7 7e-13 >seq125 Length=94255 Score = 248 bits (274), Expect = 1e-60 Identities = 550/823 (67%), Gaps = 9/823 (1%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| || || || | ||||| || || |||||||| || || ||||| | || Sbjct 18080 GCTCTCCGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTCTCCAGCTCTGCC 18139 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | ||||| || || |||| || || || |||||||| || | || ||| Sbjct 18140 CAGACTTCCATCGAGATCGACTCCCTGTTCGAGGGTATCGACTTCTACACCTCGATCACC 18199 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| || ||| | | || | || | ||||| || || || Sbjct 18200 CGTGCCCGTTTCGAGGAGCTTTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAG 18259 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || || ||||| ||||| ||||||||| || | || |||||||| || || Sbjct 18260 CGTGTCCTCCGCGACGCCAAGATTGATAAGTCTTCCGTCCACGAGATTGTCCTCGTTGGT 18319 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || |||||||| || ||||| || ||||| | || ||||||||| || || Sbjct 18320 GGTTCTACCCGTATCCCCAAGATCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 18379 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| || || || ||||| || ||||| ||||| ||||||||| Sbjct 18380 CCCAACAAGTCCATCAACCCCGACGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCT 18439 Query 196421 ATTCTCTCAGGTGTTGACAATAAT--AACGTCC----AAGATCTTCTGCTACTTGATGTT 196474 || || || || ||||| | | | |||| | || || |||| || || || Sbjct 18440 ATCCTGTC---TGGTGACACTTCTTCCAAGTCCACCAACGAGATTTTGCTTCTCGACGTC 18496 Query 196475 GCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGG 196534 || || | ||||| ||| | || || || |||||||| ||||| | || | | Sbjct 18497 GCCCCGCTTTCCCTCGGTATCGAGACCGCTGGTGGTGTCATGACCCCTCTCATCAAGCGC 18556 Query 196535 AACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCA 196594 ||||| || || || || |||||| | ||||| || || | ||| || || || Sbjct 18557 AACACCACCATCCCCACCAAGAAGTCGGAGGTCTTCTCCACCTTCAGCGACAACCAGCCT 18616 Query 196595 GGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTT 196654 ||||| | ||| || || | || || || || | || | ||||| ||| | || || Sbjct 18617 GGTGTCCTTATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTC 18676 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 || | ||||| | || || || || | || ||| | |||||||| ||||| | || Sbjct 18677 GGCAAGTTCGAGCTTACTGGCATCCCCCCGGCGCCCCGTGGTGTTCCCCAGATCGAGGTC 18736 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 |||||| | || || || ||||| | || ||| | || || |||| | ||||| Sbjct 18737 ACCTTCGACCTTGATGCCAACGGAATCATGAATGTCTCCGCCCTCGAGAAGGGTACTGGC 18796 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 || | | ||||| || || ||||| |||||||| || || || |||||||| || || Sbjct 18797 AAGACCAACAAGATCGTCATCACCAACGACAAGGGCCGTCTGTCCAAGGAGGATATCGAG 18856 Query 196835 CGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 || ||| || || || || ||||||| || || || |||| Sbjct 18857 CGCATGCTTTCTGAGGCCGAGAAGTACAAGGCTGAGGATGAGG 18899 Score = 185 bits (204), Expect = 1e-41 Identities = 180/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| |||||||| |||||||| |||||||| || | Sbjct 36382 GTGGTATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATCACGCTCGAGGTGGAAT 36441 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || ||||||||| | || | ||||| || |||||||| || ||||| || | Sbjct 36442 CTTCGGATACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGG 36501 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || || ||||| ||||| ||||| || ||||| || | || | Sbjct 36502 ACCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGACGGTCGTACGCTGTCCGACT 36561 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||||||||| ||||| ||| | || || | || || ||||| Sbjct 36562 ACAACATTCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGTGG 36613 Score = 152 bits (168), Expect = 7e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||| ||||| |||||||| || || ||||| ||| |||| | Sbjct 35672 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACCATCGACAACGTCAAGAGC 35731 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||||||||| || || ||||| || ||||| || || || || Sbjct 35732 AAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGCAAG 35791 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||| | |||||||| || ||||| | ||||||||| | || |||||||| || || || Sbjct 35792 CAGTTGGAAGATGGCCGCACCCTGTCGGATTACAACATCCAGAAGGAGTCGACCCTTCAT 35851 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 35852 CTCGTCCTCCGCCTGCGCGGTGGT 35875 Score = 152 bits (168), Expect = 7e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||| |||||||| ||||| ||||| || |||| | Sbjct 35955 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCTGACACCATCGACAATGTCAAGTCG 36014 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || |||||||| ||||| || || || ||||| || | || || ||||| || Sbjct 36015 AAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 36074 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| || || || ||||| | || |||||| | || |||||| ||||| ||| Sbjct 36075 CAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAC 36134 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| |||||| Sbjct 36135 CTCGTCCTCCGCCTTCGTGGTGGT 36158 >seq84 Length=178728 Score = 134 bits (148), Expect = 2e-26 Identities = 236/342 (69%), Gaps = 5/342 (1%) Strand=Plus/Minus Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||||| ||| ||||||||||| ||| || | | | || | ||||| | | Sbjct 15769 ATGGTCCTGAGCAAGATGAAGGATGTTGCCGAGCAGTACCTCGGCGAGACTGTTGAGAAC 15710 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || ||||| || || || || ||||||| || | || || || || |||||||| Sbjct 15709 GCCGTTGTCACGGTCCCGGCCTACTTCAACGACGCTCAGAGAGCCGCTACCAAGGACGCC 15650 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | | ||||| ||||| ||| ||| | || |||| || || || ||||| || | Sbjct 15649 GGTACCATTGCCGGTCTGAACGTTCTCCGTGTTGTCAACGAGCCCACTGCGGCCGCTCTG 15590 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAA----ATGTATTGATCTTTGATCT 195885 ||||| || ||||||||||| | ||| |||| | | | | ||| || || Sbjct 15589 GCTTACGGCCTGGACAAGAAGGATGAC-AAGACCGAGCGCCAGATCATCGTCTACGACCT 15531 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945 ||||||||||| || |||||||| |||||| | | || | ||| | ||||| || | Sbjct 15530 TGGTGGTGGTACTTTCGATGTCTCCATTCTCACTGTCGACGAGGGTGTTTTCGAGGTCCA 15471 Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||||||||||||| ||||| || |||||||| ||||| || Sbjct 15470 GGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTTGA 15429 >seq63 Length=225829 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||| ||||| || ||||| || Sbjct 137910 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCAT 137969 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || |||| |||||| || || ||||| |||||||| || || ||||| || || Sbjct 137970 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 138029 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || ||||| || ||||| || ||||| | || |||||| | || || Sbjct 138030 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 138089 Query 172050 GG 172051 || Sbjct 138090 GG 138091 >seq41 Length=302175 Score = 113 bits (124), Expect = 6e-20 Identities = 189/273 (69%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||||| || || || ||||| || |||||||| | | ||| Sbjct 141643 ACCGTCCCTGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGCTCCATT 141702 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || ||||| ||| || | || ||||| || || || || || || ||||| || ||| Sbjct 141703 GCCGGTCTCAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCCGCCATTGCCTACGGT 141762 Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| || | || || |||||| || |||||||||||| Sbjct 141763 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTGATCTACGACCTCGGTGGTGGT 141822 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || || || | || | || ||| | ||| || ||||| || ||| Sbjct 141823 ACTTTCGATGTTTCCCTCCTGCACATCCAGGGCGGTGTCTTCACCGTCAAGGCCACCGCT 141882 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| ||||| || |||||| | || |||||| Sbjct 141883 GGTGACACTCACCTTGGTGGTCAGGACTTCGAT 141915 >seq27 Length=442993 Score = 107 bits (118), Expect = 3e-18 Identities = 222/328 (68%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTT-TCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720 |||||||||||||| || ||| ||| || | | | ||| || || | || || || || Sbjct 258593 AAGATGAAGGAGACCGCCGAAGCTTATCTTAGCAAGAAC-GTCAAGAACGCCGTCGTCAC 258651 Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 || || || ||||||| || || || || ||||| || ||||| || | | || | Sbjct 258652 CGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACTAAGGATGCCGGTCAGATCTC 258711 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||||| ||| || | | |||| || || || ||||| || ||||||| ||||| Sbjct 258712 TGGTCTGAACGTCCTCCGTGTCGTCAACGAGCCCACTGCGGCCGCTCTTGCTTACGGTCT 258771 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 ||| ||| | ||||| | | || ||| ||||| ||||||||||| || Sbjct 258772 GGAGAAGGAGCAGGACCGCGTCATTGCTG------TCTACGATCTTGGTGGTGGTACTTT 258825 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||| |||| |||| | ||| | ||| | || || || ||| | || ||||| Sbjct 258826 CGATATCTCCATTCTTGAGATTCAGAACGGTGTCTTTGAGGTCAAGTCCACCAACGGTGA 258885 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| || |||||||| ||||||||| Sbjct 258886 CACTCACCTCGGTGGTGAGGATTTCGAT 258913 >seq3 Length=900425 Score = 89.7 bits (98), Expect = 7e-13 Identities = 164/237 (69%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598 ||||||| ||| || ||||| || | ||| | ||| | || |||||||| || || || Sbjct 851014 TGGTGCCAAAATTCCTCGTGGCGCCATCCTCTCTGGTCCTCCTGGTACTGGCAAGACGCT 850955 Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCT--CCGCGGCG 198656 || ||| || | || |||||||| || ||||| |||||| | | | || || Sbjct 850954 GCTTGCTAAGGCCACTGCCGGTGAATCCCAGGTGCCCTT-CTTCAGCGTTAGCGGCTCCG 850896 Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716 |||| | | ||||||||||| ||||||||| | | || || || | |||| | Sbjct 850895 AGTT-CGTGGAGATGTTCGTCGGTGTTGGTCCCTCCAGAGTACGAGATTTGTTTGCAACA 850837 Query 198717 GCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAG 198773 || || | | | || || ||||||||||||||||| || |||||| | || ||| Sbjct 850836 GCGCGGAAGAGTACCCCCTGCATCATCTTCATTGATGAAATCGACGCTATCGGCAAG 850780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657853074800480