Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq125 248 1e-60
seq84 134 2e-26
seq63 131 2e-25
seq41 113 6e-20
seq27 107 3e-18
seq3 89.7 7e-13
>seq125
Length=94255
Score = 248 bits (274), Expect = 1e-60
Identities = 550/823 (67%), Gaps = 9/823 (1%)
Strand=Plus/Plus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120
||||| || || || | ||||| || || |||||||| || || ||||| | ||
Sbjct 18080 GCTCTCCGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTCTCCAGCTCTGCC 18139
Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180
|| || | ||||| || || |||| || || || |||||||| || | || |||
Sbjct 18140 CAGACTTCCATCGAGATCGACTCCCTGTTCGAGGGTATCGACTTCTACACCTCGATCACC 18199
Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240
||||| ||||| || ||| | | || | || | ||||| || || ||
Sbjct 18200 CGTGCCCGTTTCGAGGAGCTTTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAG 18259
Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300
| || || || ||||| ||||| ||||||||| || | || |||||||| || ||
Sbjct 18260 CGTGTCCTCCGCGACGCCAAGATTGATAAGTCTTCCGTCCACGAGATTGTCCTCGTTGGT 18319
Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360
|| || |||||||| || ||||| || ||||| | || ||||||||| || ||
Sbjct 18320 GGTTCTACCCGTATCCCCAAGATCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 18379
Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420
||||| | |||||||| || || || ||||| || ||||| ||||| |||||||||
Sbjct 18380 CCCAACAAGTCCATCAACCCCGACGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCT 18439
Query 196421 ATTCTCTCAGGTGTTGACAATAAT--AACGTCC----AAGATCTTCTGCTACTTGATGTT 196474
|| || || || ||||| | | | |||| | || || |||| || || ||
Sbjct 18440 ATCCTGTC---TGGTGACACTTCTTCCAAGTCCACCAACGAGATTTTGCTTCTCGACGTC 18496
Query 196475 GCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGG 196534
|| || | ||||| ||| | || || || |||||||| ||||| | || | |
Sbjct 18497 GCCCCGCTTTCCCTCGGTATCGAGACCGCTGGTGGTGTCATGACCCCTCTCATCAAGCGC 18556
Query 196535 AACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCA 196594
||||| || || || || |||||| | ||||| || || | ||| || || ||
Sbjct 18557 AACACCACCATCCCCACCAAGAAGTCGGAGGTCTTCTCCACCTTCAGCGACAACCAGCCT 18616
Query 196595 GGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTT 196654
||||| | ||| || || | || || || || | || | ||||| ||| | || ||
Sbjct 18617 GGTGTCCTTATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTC 18676
Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714
|| | ||||| | || || || || | || ||| | |||||||| ||||| | ||
Sbjct 18677 GGCAAGTTCGAGCTTACTGGCATCCCCCCGGCGCCCCGTGGTGTTCCCCAGATCGAGGTC 18736
Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774
|||||| | || || || ||||| | || ||| | || || |||| | |||||
Sbjct 18737 ACCTTCGACCTTGATGCCAACGGAATCATGAATGTCTCCGCCCTCGAGAAGGGTACTGGC 18796
Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834
|| | | ||||| || || ||||| |||||||| || || || |||||||| || ||
Sbjct 18797 AAGACCAACAAGATCGTCATCACCAACGACAAGGGCCGTCTGTCCAAGGAGGATATCGAG 18856
Query 196835 CGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
|| ||| || || || || ||||||| || || || ||||
Sbjct 18857 CGCATGCTTTCTGAGGCCGAGAAGTACAAGGCTGAGGATGAGG 18899
Score = 185 bits (204), Expect = 1e-41
Identities = 180/232 (78%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || ||||| |||||||| |||||||| |||||||| || |
Sbjct 36382 GTGGTATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATCACGCTCGAGGTGGAAT 36441
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || || || ||||||||| | || | ||||| || |||||||| || ||||| || |
Sbjct 36442 CTTCGGATACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGG 36501
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || || || || ||||| ||||| ||||| || ||||| || | || |
Sbjct 36502 ACCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGACGGTCGTACGCTGTCCGACT 36561
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
||||| ||||||||||||| ||||| ||| | || || | || || |||||
Sbjct 36562 ACAACATTCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGTGG 36613
Score = 152 bits (168), Expect = 7e-32
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || |||||||| ||||| |||||||| || || ||||| ||| |||| |
Sbjct 35672 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACCATCGACAACGTCAAGAGC 35731
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || || |||||||||||||| || || ||||| || ||||| || || || ||
Sbjct 35732 AAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGCAAG 35791
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||| | |||||||| || ||||| | ||||||||| | || |||||||| || || ||
Sbjct 35792 CAGTTGGAAGATGGCCGCACCCTGTCGGATTACAACATCCAGAAGGAGTCGACCCTTCAT 35851
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | || || ||||||
Sbjct 35852 CTCGTCCTCCGCCTGCGCGGTGGT 35875
Score = 152 bits (168), Expect = 7e-32
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
||||| || || |||||||||||||| |||||||| ||||| ||||| || |||| |
Sbjct 35955 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCTGACACCATCGACAATGTCAAGTCG 36014
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || |||||||| ||||| || || || ||||| || | || || ||||| ||
Sbjct 36015 AAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 36074
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|||||||| || || || ||||| | || |||||| | || |||||| ||||| |||
Sbjct 36075 CAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAC 36134
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | ||||| ||||||
Sbjct 36135 CTCGTCCTCCGCCTTCGTGGTGGT 36158
>seq84
Length=178728
Score = 134 bits (148), Expect = 2e-26
Identities = 236/342 (69%), Gaps = 5/342 (1%)
Strand=Plus/Minus
Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709
||||| ||| ||||||||||| ||| || | | | || | ||||| | |
Sbjct 15769 ATGGTCCTGAGCAAGATGAAGGATGTTGCCGAGCAGTACCTCGGCGAGACTGTTGAGAAC 15710
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| ||||| || || || || ||||||| || | || || || || ||||||||
Sbjct 15709 GCCGTTGTCACGGTCCCGGCCTACTTCAACGACGCTCAGAGAGCCGCTACCAAGGACGCC 15650
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| | | ||||| ||||| ||| ||| | || |||| || || || ||||| || |
Sbjct 15649 GGTACCATTGCCGGTCTGAACGTTCTCCGTGTTGTCAACGAGCCCACTGCGGCCGCTCTG 15590
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAA----ATGTATTGATCTTTGATCT 195885
||||| || ||||||||||| | ||| |||| | | | | ||| || ||
Sbjct 15589 GCTTACGGCCTGGACAAGAAGGATGAC-AAGACCGAGCGCCAGATCATCGTCTACGACCT 15531
Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945
||||||||||| || |||||||| |||||| | | || | ||| | ||||| || |
Sbjct 15530 TGGTGGTGGTACTTTCGATGTCTCCATTCTCACTGTCGACGAGGGTGTTTTCGAGGTCCA 15471
Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||||||||||||| ||||| || |||||||| ||||| ||
Sbjct 15470 GGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTTGA 15429
>seq63
Length=225829
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929
||| || || ||||| || || || || |||||||||||||| ||||| || ||||| ||
Sbjct 137910 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCAT 137969
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| || |||| |||||| || || ||||| |||||||| || || ||||| || ||
Sbjct 137970 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 138029
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
|| || || || || ||||| || ||||| || ||||| | || |||||| | || ||
Sbjct 138030 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 138089
Query 172050 GG 172051
||
Sbjct 138090 GG 138091
>seq41
Length=302175
Score = 113 bits (124), Expect = 6e-20
Identities = 189/273 (69%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || ||||| ||||||| || || || ||||| || |||||||| | | |||
Sbjct 141643 ACCGTCCCTGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGCTCCATT 141702
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| ||||| ||| || | || ||||| || || || || || || ||||| || |||
Sbjct 141703 GCCGGTCTCAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCCGCCATTGCCTACGGT 141762
Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | |||| ||| || | || || |||||| || ||||||||||||
Sbjct 141763 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTGATCTACGACCTCGGTGGTGGT 141822
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || ||||| || || || | || | || ||| | ||| || ||||| || |||
Sbjct 141823 ACTTTCGATGTTTCCCTCCTGCACATCCAGGGCGGTGTCTTCACCGTCAAGGCCACCGCT 141882
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988
||||| ||||| || |||||| | || ||||||
Sbjct 141883 GGTGACACTCACCTTGGTGGTCAGGACTTCGAT 141915
>seq27
Length=442993
Score = 107 bits (118), Expect = 3e-18
Identities = 222/328 (68%), Gaps = 8/328 (2%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTT-TCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720
|||||||||||||| || ||| ||| || | | | ||| || || | || || || ||
Sbjct 258593 AAGATGAAGGAGACCGCCGAAGCTTATCTTAGCAAGAAC-GTCAAGAACGCCGTCGTCAC 258651
Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780
|| || || ||||||| || || || || ||||| || ||||| || | | || |
Sbjct 258652 CGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACTAAGGATGCCGGTCAGATCTC 258711
Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840
||||| ||| || | | |||| || || || ||||| || ||||||| |||||
Sbjct 258712 TGGTCTGAACGTCCTCCGTGTCGTCAACGAGCCCACTGCGGCCGCTCTTGCTTACGGTCT 258771
Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900
||| ||| | ||||| | | || ||| ||||| ||||||||||| ||
Sbjct 258772 GGAGAAGGAGCAGGACCGCGTCATTGCTG------TCTACGATCTTGGTGGTGGTACTTT 258825
Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960
||| |||| |||| | ||| | ||| | || || || ||| | || |||||
Sbjct 258826 CGATATCTCCATTCTTGAGATTCAGAACGGTGTCTTTGAGGTCAAGTCCACCAACGGTGA 258885
Query 195961 TACTCATCTAGGTGGTGAAGATTTCGAT 195988
||||| || |||||||| |||||||||
Sbjct 258886 CACTCACCTCGGTGGTGAGGATTTCGAT 258913
>seq3
Length=900425
Score = 89.7 bits (98), Expect = 7e-13
Identities = 164/237 (69%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598
||||||| ||| || ||||| || | ||| | ||| | || |||||||| || || ||
Sbjct 851014 TGGTGCCAAAATTCCTCGTGGCGCCATCCTCTCTGGTCCTCCTGGTACTGGCAAGACGCT 850955
Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCT--CCGCGGCG 198656
|| ||| || | || |||||||| || ||||| |||||| | | | || ||
Sbjct 850954 GCTTGCTAAGGCCACTGCCGGTGAATCCCAGGTGCCCTT-CTTCAGCGTTAGCGGCTCCG 850896
Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716
|||| | | ||||||||||| ||||||||| | | || || || | |||| |
Sbjct 850895 AGTT-CGTGGAGATGTTCGTCGGTGTTGGTCCCTCCAGAGTACGAGATTTGTTTGCAACA 850837
Query 198717 GCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAG 198773
|| || | | | || || ||||||||||||||||| || |||||| | || |||
Sbjct 850836 GCGCGGAAGAGTACCCCCTGCATCATCTTCATTGATGAAATCGACGCTATCGGCAAG 850780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657853074800480
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