Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8 167 3e-35 seq95 159 4e-33 seq33 136 5e-26 seq49 131 2e-24 seq40 127 2e-23 seq16 116 5e-20 seq12 111 2e-18 seq31 98.7 1e-14 >seq8 Length=768349 Score = 167 bits (184), Expect = 3e-35 Identities = 342/499 (69%), Gaps = 12/499 (2%) Strand=Plus/Minus Query 1852159 CGCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 1852218 ||| | ||| || ||||| | ||| || ||||| ||||| |||| ||||| |||| Sbjct 219685 CGCCAGGGCGAAGATCTTCCTCTGATCCACGCCGCCGAACTGCACGTCCACGTCCAGGTA 219626 Query 1852219 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTG-CGGT 1852277 ||||||||| || ||||||||||||||||||| || | || ||||||||| | || Sbjct 219625 CTGCTCGTCCAGAGCCTGCATGAGCGGGTAGATCAGGCCCGATAGCAGCGGGTTGTCCGT 219566 Query 1852278 CCATCTTGACCACCTGAGCGGCGGCCTTTTGCGC--CGTGC-CGGTGCGCACG-TGCGCC 1852333 | |||||| |||| || ||||| | | ||| ||||| ||||| || | ||| | Sbjct 219565 CTG-CTTGACGACCTCGGCACCGGCCCTCTTCGCATCGTGCTCGGTGGTCATGGTGCTC- 219508 Query 1852334 GCGAGTCGGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACA 1852393 || || ||||| | | |||| | | |||||||||| |||| |||| Sbjct 219507 ---AGGCGCAGCAGGTCCATCATGTAGTCCGAACTCTTCTGGTACTCGCTGCCCAGCACG 219451 Query 1852394 AACTCGAGTCCGCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCG 1852453 ||||| || | | | ||||||||| | | || |||| | ||||| | | || | Sbjct 219450 AACTCCAGACGATCGACCGGCACGCCCACGGCCTTGAGCGACTCGGTGATGACGAGCTTG 219391 Query 1852454 TACCAGCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCG-TTGTCGAGGTGGGC 1852512 || | | |||| | |||||| || | || | ||| | | ||||| ||| ||| Sbjct 219390 TAGTACTTGGCGCGGTAGTTGACCAGCTCA-ATGGGGGCTTTCAGGTTGTCCAGGAAGGC 219332 Query 1852513 GTGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTT 1852572 || | |||||| | ||||| ||||| | ||||||||||| || || | ||| | || Sbjct 219331 ATGGATGTCGGCTAGCAGGATTTTGACGTGGCAGCCGGCCTGCAGGAACTGGGCGATCTT 219272 Query 1852573 GAAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATAT 1852632 || |||||||| |||||||| |||||| |||| || | ||| |||||||| || || Sbjct 219271 GAGCATGGGCACGAAGTAGCCGCAGTGCGGCCTGCCGGTGGTCGCGGTGCCCCAGTAGAT 219212 Query 1852633 GATCAGGGGGCGCTCGGCC 1852651 | || || |||||| || Sbjct 219211 CTTGAGCGGCCGCTCGCCC 219193 >seq95 Length=147769 Score = 159 bits (176), Expect = 4e-33 Identities = 233/325 (72%), Gaps = 11/325 (3%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||| || || |||||| |||||| |||||||||||||| | |||||||| Sbjct 14112 CGCCTTCTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGAT 14171 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 |||||| | ||| ||||||| | |||||| ||| | | || || | | | Sbjct 14172 GTTCTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTGCCCAGTGCCAC 14231 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||||||||||| ||||| ||||| |||||||||| ||| || |||||||||||||| Sbjct 14232 CAGCAGGCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGCGTTCATGCCGAG 14291 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 ||| || || || || | || | | ||||| |||||||| || ||||||||| ||| Sbjct 14292 GAGAGCGACGGGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGAT 14351 Query 868930 GATCTGCCTG--GGCACGTCGGCCGAGGGCTT---GTTGACGAGCATCGTGTAGAGCAGG 868984 ||||| | | |||| |||| |||||| |||| | | || | | |||||| Sbjct 14352 GATCTTCTCGACGGCA--TCGGGGCTGGGCTTCGACTTGATGTG---CGAGAACAGCAGG 14406 Query 868985 CAGGCAAAGTCGCAGTGCA-ACCCT 869008 || || |||||| |||| ||||| Sbjct 14407 CAAGCGAAGTCGGTATGCATACCCT 14431 Score = 120 bits (132), Expect = 4e-21 Identities = 179/253 (71%), Gaps = 7/253 (3%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| |||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 14761 GAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGGATCTGG 14820 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| |||||||| || ||||||||| Sbjct 14821 ACCTCGGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATGCCATCAGAGGCGGCGAAG 14880 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC-----CCAGT 869807 ||||| |||||||| ||| ||| |||||| |||||| ||| ||| | ||||| Sbjct 14881 AAAGCGAGGACGTGGGAGATGAAGAAGCGCTCATCGTCGTTGA--GACGCTTGTTCCAGT 14938 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | ||| | ||| || | |||||| || ||||||| ||||| || ||||| | Sbjct 14939 CGTGAAGGTCCTTGGAGAGATCGATCTCCTCAGCCGTCCAGAAAGAGGCTTCAGCCTTCT 14998 Query 869868 TGTACATCTCCCA 869880 ||||||||| ||| Sbjct 14999 TGTACATCTGCCA 15011 Score = 91.5 bits (100), Expect = 2e-12 Identities = 143/203 (70%), Gaps = 9/203 (4%) Strand=Plus/Plus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| ||| ||||| ||| ||| | ||||| || | ||| ||||||||||||| Sbjct 14420 TATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCATGAGGC 14479 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 | |||||||| ||||| ||||||| ||| || ||| ||||| |||||||| | Sbjct 14480 CACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTCGACAG 14539 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACT 869348 | ||||| |||| || ||| || || |||||| | ||||| |||||| Sbjct 14540 CCGCAAAAGCGATCAGGCGCGATGCGAA--AGTCGAG----TTCTTGTCGCAGATCCAGC 14593 Query 869349 TCATCGCCCAGTCGGCCTTTTTC 869371 || |||||||||||||| ||| Sbjct 14594 GCAGGGCCCAGTCGGCCTTCTTC 14616 >seq33 Length=364332 Score = 136 bits (150), Expect = 5e-26 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 19041 CAAGAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTC 19100 || || || ||||||||||| || |||| |||||| |||||||||||| | |||||| Sbjct 234440 CAGGATGATAGCATCGGCGGTACAGTGAGCTGCGTGATCCGCAACGTGCCGTCTGGCCTC 234381 Query 19101 GGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCG 19160 |||||||| |||||||||||| |||| ||| |||| || ||||||||||| || || Sbjct 234380 GGCGAGCCTTGCTTTGACAAGCTCGAAGCCACGCTTGCGCACGCCATGCTTAGCATTCCA 234321 Query 19161 GCCACCAAGGGATTCGAGATTGG 19183 || || ||||| ||||||||||| Sbjct 234320 GCTACTAAGGGCTTCGAGATTGG 234298 Score = 104 bits (114), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTG 18152 || || ||||||||||||| | |||||||| ||| |||||||| || ||| | Sbjct 235115 CAGCTATGGCGAGTCGCACTGCCTCTCAGTCGGCTGTATCGTCGACGGCTGCCCTCCGGG 235056 Query 18153 CATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGG 18212 ||||| || |||||||||| |||||||| ||| || || || || || |||||| | Sbjct 235055 CATGCAGCTCACCGAGGCCGATATCCAGCCCCAGATGACGCGCCGTCGCCCCGGCCAGAG 234996 Query 18213 CGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAA 18272 |||| | |||| || |||||||| || |||||| ||||| || || || ||| Sbjct 234995 CGCAATCACCACTCCTCGCAACGAAAAAGACCGCGTCGAGATCCAATCCGGTACTGAGTT 234936 Query 18273 CGGCCTCACGCTCGG 18287 ||| | ||||| || Sbjct 234935 CGGTGTGACGCTGGG 234921 >seq49 Length=264639 Score = 131 bits (144), Expect = 2e-24 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||||||||||||| | || || ||| |||| |||||| | || || ||| Sbjct 204850 GCCGCCAACTACCTCGACATCAAGGCCCTTCTTGATGTTGGCTGCAAGACCGTCGCAAAC 204909 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||| ||||| |||||||| || |||||| || ||| Sbjct 204910 ATGATCAAGGGCAAGTCTCCCGACGAGATTCGCAAGACGTTCAACATCCAGAACG 204964 >seq40 Length=306130 Score = 127 bits (140), Expect = 2e-23 Identities = 121/154 (79%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTC----GCAACGTGCCGGCAGGCCTC 19100 |||| ||||| ||||| ||||| ||| |||||| | |||||||| | |||||| Sbjct 263104 AGGATAGCATTGGCGGGACGGT----TGCCTGTGTCATCAGAAACGTGCCTTCTGGCCTC 263159 Query 19101 GGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCG 19160 ||||||||||||||||| ||| | || ||| ||||||||| ||||||||| ||||| Sbjct 263160 GGCGAGCCGTGCTTTGATAAGCTGGAAGCCAAGCTCGCCCATGCCATGCTGAGCATCCCT 263219 Query 19161 GCCACCAAGGGATTCGAGATTGGCAGCGGGTTTG 19194 |||||||| ||||||||||| || ||||||| Sbjct 263220 GCCACCAAAGGATTCGAGATCGGGTCTGGGTTTG 263253 Score = 107 bits (118), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCA 18179 ||||||||| ||| |||| ||| || || |||||| ||| || | | ||||||||| Sbjct 262438 CGTCGGCTGTATCGTCGATGGCTGCCCACCAGGCATGCGACTCACCCAAGTCGACATCCA 262497 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 ||| ||| | || || || ||||||||| |||| | | ||||||||||||||| Sbjct 262498 GCCCCAGCTAACGCGACGGCGGCCGGGCCAGAGCGCCATCACGACGCCGCGCAACGAGAA 262557 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299 || | ||| |||||||||||||||||| ||| |||| | ||| |||| |||| Sbjct 262558 GGACAGGGTCGAGATCCAGTCGGGCACGGAGTTGGGCGTCACTTTGGGCACGCCGATCGG 262617 Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 || ||| ||| |||||||||| | ||||| Sbjct 262618 GCTGCGCGTGCTGAACGAGAACCAGCGGCCGGAAGACTA 262656 Score = 87.8 bits (96), Expect = 2e-11 Identities = 231/345 (67%), Gaps = 7/345 (2%) Strand=Plus/Plus Query 1726698 CGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGAAGCCG 1726756 |||||| | |||||||| || || || | | | |||||||||||||||||||| ||| Sbjct 259971 CGGCGCCGATGGCGTCGA-TGGCGACGTCGAAGGAGCCGTCGGTGCCGTTCTTGAATCCG 260029 Query 1726757 ATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCG 1726816 | || | | ||| | || || | ||||||||| | |||||| || || ||||||||| Sbjct 260030 ACGGGAAAGGACAGGCCGGATGCTAACTCGCGGTGGAGCTGGCTTTCAGTGGTGCGCGCG 260089 Query 1726817 CCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA-AGGGGCCACCAGAGGACTGAGAAA 1726875 || | |||||| | | |||||| || | || | ||| | | | | ||| | Sbjct 260090 CCGATGGCGCCGACGGTGATCAGGTCGGCGAGGTATTGCGGCGAGATGGTGTC-GAGCAT 260148 Query 1726876 CTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGCGGCGCGACGC 1726935 ||| ||| | |||| ||| | | ||| ||| |||| | || ||| | Sbjct 260149 CTCACTGGCGATGGGC--ATC-CCCATGTTAGTGAGGTCGACGAACATCTGTCGAGACAC 260205 Query 1726936 CGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTT 1726995 |||||| | | | | | |||| ||| | ||| |||||| || ||| ||||| Sbjct 260206 GCGCAGGCCCTTGTTGATCCTGAACGAGTTGTCCATGTCCGGGTCGTTGATCAGTCCCTT 260265 Query 1726996 CCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 1727040 ||| |||||||| || || ||||| |||| || |||||||| || Sbjct 260266 CCAGCCGACGGTGGTCCGGGGCTTCTCGAGGTACGCGCGCATCAC 260310 >seq16 Length=571565 Score = 116 bits (128), Expect = 5e-20 Identities = 141/190 (74%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 1726965 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 1727024 |||| | ||| |||||| || |||||||||||| |||||||| ||||| ||||| |||| Sbjct 249257 CGTCAATGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGA 249198 Query 1727025 CATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCA 1727084 ||||||||||||| | ||| ||| || ||| | || | |||| | | ||| || Sbjct 249197 GGTAGGCGCGCATGATGATGCAGAGCTCGCCGCTCAGCT--TATCGG-CCAGGGCCTTCA 249141 Query 1727085 GGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAA 1727144 ||||| || | || |||||| ||| |||||||||| || || || || || || | Sbjct 249140 GGCGTTGGGCGTACTCGACGGCGGTTTCCGGGTCGTGGATGGAGCAAGGGCCGACCATGA 249081 Query 1727145 CCAGCAGCCG 1727154 ||||||| || Sbjct 249080 CCAGCAGGCG 249071 >seq12 Length=708323 Score = 111 bits (122), Expect = 2e-18 Identities = 178/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| ||||| || |||| ||| | || |||||||| || | |||||||||| Sbjct 538884 CTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATGAGGCCGTTG-- 538827 Query 1630125 CTCG--CCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAG 1630182 || | ||||||||||| || | ||| ||| | ||||| | ||| | | | Sbjct 538826 CTGGTACCGTTGGTGCCAGCAATATAGCTGCCAGTAGCGCGAATACGGTGGACATTGAGG 538767 Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 ||||| || ||||| | |||||| || | ||||| || || || |||||||| ||| Sbjct 538766 CCGATACCACCGGCGGTCTTGGAAATCATGGCGCAGGTCTTCAGGGTATCGTAGATACCC 538707 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 || || ||| |||||||||| | ||| ||||| || | || || | | || Sbjct 538706 TCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGCCAGCTGAGGCTTGGGAGTA 538647 Query 1630303 CCGGCGTTGAAGAG 1630316 |||||||||||||| Sbjct 538646 CCGGCGTTGAAGAG 538633 >seq31 Length=376868 Score = 98.7 bits (108), Expect = 1e-14 Identities = 215/317 (68%), Gaps = 5/317 (2%) Strand=Plus/Plus Query 1726725 CCACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCT 1726784 ||| | | ||||| ||||||||||||||||||| || | | ||| | || || | || Sbjct 277636 CCAGGGTGCCGTCAGTGCCGTTCTTGAAGCCGACGGGGAAGGACAGACCAGAAGCAAGCT 277695 Query 1726785 CGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGC-CACCAGGTCT 1726843 | ||||||| ||||||||||||||| | |||||| || ||| || |||| || || || Sbjct 277696 CACGGTGCAGCTGGCTCTCGGTCGTCCTCGCGCCAACAGCG-CCAACGCTCAAAAGATCA 277754 Query 1726844 GCCAAATAAGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCG 1726903 ||||| | | | | | | || | |||| || | |||| || | || | Sbjct 277755 GCCAAGAACTGAGGAGAAATGGTATCCAGCATCTCGCTCGCAATGGGC--AT-GCCGCGG 277811 Query 1726904 ACGACGAGATCGCGCAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGAC 1726963 || | ||| || || ||||||| | |||| || | | || || | || Sbjct 277812 TCGGTCAAGTCGACGAAGAGCTGGCGCGATATCCTCAGACCCTTGTTCATCTGGAAAGAG 277871 Query 1726964 CCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCG 1727023 ||||| || |||||| || |||||||||||| || ||||| ||||| ||||| || Sbjct 277872 TTGTCGATATCTGGGTCGTTGATCAGGCCCTTCCAGCCCACGGTGGTGCGGGGCTTCTCA 277931 Query 1727024 ACATAGGCGCGCATGAC 1727040 | |||| ||||||||| Sbjct 277932 AGGTAGGAGCGCATGAC 277948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107046138649478