Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq63 123 2e-23
seq125 114 8e-21
seq22 89.7 3e-13
>seq63
Length=225829
Score = 123 bits (136), Expect = 2e-23
Identities = 145/193 (75%), Gaps = 10/193 (5%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| |||| |||| || || ||||| ||||||||||
Sbjct 138091 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138032
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | ||||||||||| | || || ||||| ||
Sbjct 138031 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGAC--AT- 137975
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| ||| || |||||| || | ||| |||||||| ||||||||||||||
Sbjct 137974 -TGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 137916
Query 34964 ACAAAGATCTGCA 34976
|| ||| |||||
Sbjct 137915 ACGAAG--CTGCA 137905
>seq125
Length=94255
Score = 114 bits (126), Expect = 8e-21
Identities = 156/217 (72%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | ||| ||||||||| ||||| |||||||| || |||| | ||
Sbjct 36371 CAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTC 36312
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| || |||||||| |||| | |||||||||||
Sbjct 36311 CTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTTGTC 36252
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || || || | ||||||| || | || || || | || |
Sbjct 36251 CTGGATCTTCGACTTCAC----GTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGA 36196
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||||||| ||||| ||||| || |||||||||||
Sbjct 36195 TAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 104 bits (114), Expect = 2e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| ||| ||||||||| ||||| || ||||| ||| |||| ||||
Sbjct 35859 AGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCATCT 35800
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| ||||||||||| || || |||||||| | || | || ||||||||
Sbjct 35799 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC 35740
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| |||| ||| ||||||
Sbjct 35739 TGGATCTTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTC 35680
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 35679 TTGCCGGTGA 35670
Score = 96.9 bits (106), Expect = 2e-15
Identities = 138/192 (72%), Gaps = 8/192 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||||||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 36142 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 36083
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| || |||||||| | || | |||||||| ||
Sbjct 36082 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC 36023
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| ||| | |||||| || | ||| ||
Sbjct 36022 TGGATCTTCGACTTGAC--AT--TGTCGATGGTGTCAGACGACTCGACCTCGAGGGTGAT 35967
Query 34942 GGTCTTTCCCGT 34953
|||||| || ||
Sbjct 35966 GGTCTTGCCAGT 35955
>seq22
Length=487495
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| |||| ||||||||| ||||| || ||||| || |||| ||||
Sbjct 64063 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCATCC 64004
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||| |||| || |||||||| | || | |||||||||||
Sbjct 64003 TCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 63945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325688298721946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |