Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq95 98.7 1e-15 >seq95 Length=147769 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 || ||||| || ||||| || ||||| ||||||| || | ||||| || | | ||| Sbjct 14345 GAGGCCGTAGATATCGAGAAGGAGTTCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGC 14286 Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50621 |||||||| | | ||| || ||||||||||||| || |||||| | || || || Sbjct 14285 ATGAACGCCAATCTTATGCGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCA 14226 Query 50622 CTGGGACAAC-CGAAATACTATAA-TGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50679 ||||| |||| ||| | ||| || | ||| |||||||| || ||| | ||||| | Sbjct 14225 CTGGG-CAACAAGAAGTTCTACAACTCCAC-CAACCCCTTCGACTTCATGGAGAACATCT 14168 Query 50680 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726 || | | ||||| || ||||| ||||| | || || || || ||| Sbjct 14167 CGCTTAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTAC 14121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488537074888800