Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq125 105 1e-17 >seq125 Length=94255 Score = 105 bits (116), Expect = 1e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||||||| || || || || || || || || || || | | ||| Sbjct 36602 ACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACC 36543 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || || || ||||| || | || || || || || || || ||||| Sbjct 36542 GTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTT 36483 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || ||||| | || || || || || ||||| || ||| || || | || || Sbjct 36482 ATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGAT 36423 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | ||||| || || |||||||| Sbjct 36422 AGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981812934664426