Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq12 223 3e-53 seq95 167 2e-36 seq63 111 2e-19 seq125 100 3e-16 seq22 86.0 6e-12 >seq12 Length=708323 Score = 223 bits (246), Expect = 3e-53 Identities = 947/1472 (64%), Gaps = 37/1472 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| ||| || ||||| || ||||||||||| ||||| | | || || |||| Sbjct 540143 GACTGCGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGATGGTACGCTGA 540084 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | ||||||| | |||||||| ||| |||||| | ||| || ||| | || Sbjct 540083 GAG---AGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCCGGGATGTTGGGAATT 540027 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 |||| | |||||| | |||| || | || ||| | ||||| | || | Sbjct 540026 TGCTGGATGGAGCCGTTGGAAGCAATGATGCGGTTCTTCATCTGGTCCGACCACAGACCG 539967 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| |||||| | | || | | || || ||||| ||||| ||||| | || Sbjct 539966 AGGTCGACCAGGTCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCACCGGCCAAGACA 539907 Query 148290 CGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || || ||| || | ||| || | || || || |||||||| ||| | |||||| Sbjct 539906 CGGCG-AGAGTAAATGTTCGAAGTGTAAGGCTCGAAGCACTCGTTGAAGCCAAGAATCTG 539848 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408 ||| | || || |||||| ||| || ||||| |||||||| | |||| | | Sbjct 539847 ACTGGTAGAGGCAGTAGGCATGGGCGCAACGAGCAGGGAGTTGCGGACACCGTGCTGGGC 539788 Query 148409 TATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467 | | |||||| || | |||||||||| || | || | | ||||||||||| Sbjct 539787 GACCTCAGCCTTCAG-GCTGTCCCAGTCCCACAGGTCAGTGGGGGCCTTGTTCCACATGT 539729 Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 | |||||||||||||| || ||||||||| |||| | ||| || || ||||| Sbjct 539728 CATACTGCAGAATGCCTTGGGAAGCGGGGCTACCCTGGAACGTCTCATAGGGGCCGTGTT 539669 Query 148528 CCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587 | || || || | || || || ||| ||| || |||||| || || Sbjct 539668 GCTTGGCGAGCTCAATGGAGGCAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAA 539609 Query 148588 TGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 ||||||| || ||| ||| | |||||||| || || || || |||| Sbjct 539608 TGTTGAGGTGCTTGGCCTCAGGAGAATCGAAGGGCATACGAAGAGCCAGGAAAGCATCGG 539549 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 | || || | || || || ||||||| || || |||||| | || ||| Sbjct 539548 CGAGACCGTTGACACCAACAGCAATGGGGCGATGGCGCATGTTGCTCCTCCTAGC-CTCC 539490 Query 148708 CGAGCGGA-TAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTA 148766 | ||| ||||||||| |||||||||||||| || || || | ||| | || Sbjct 539489 GGCACGGGGTAGTGGTTGATGTCGATGATCTTGTTCAGGTTCTTGACGAGCACTTGAGTG 539430 Query 148767 ATTCTGCGCAGC------AATTCAAAATCG---TACTTGTCATCTACGATGCATCGGTTC 148817 | | ||| || ||| || | | || | ||| || | | | || Sbjct 539429 ACATCATGAAGCTTCTTGAAGTCATAAACTCCCTGCTCGACATTGACAAAGG-TAGGA-- 539373 Query 148818 ACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877 | || | || || || ||||| || || |||||| ||||| ||||||| || ||| Sbjct 539372 AGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACAATC 539313 Query 148878 TCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG 148937 ||| ||| || ||| || ||| ||| | |||||| || |||||||||| |||| Sbjct 539312 TCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG 539253 Query 148938 CACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAAC 148997 || |||||||||||||||| | || |||||| || ||||| | || | ||| Sbjct 539252 CAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCCTCAAGAATGG-- 539195 Query 148998 CGATGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTATAAA 149054 || ||| | ||| || || || || | || | ||||||||| |||||| Sbjct 539194 CGTACCAGAGCTTCTGGGCACGAACGGTCT-CACGACCCCGACCCTCCTTCTCGTACTGC 539136 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 ||||| ||||||| | ||||||||| ||| | ||||| ||||||| || ||| Sbjct 539135 TCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGG 539076 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 ||||| || | ||| ||||| | | || |||||||| || |||||||| | ||| Sbjct 539075 CACATCAGAGTCCAGGTGCCGTTCTGTTCGACACGCTTCATGAAGAGATCGGGGATCCAC 539016 Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG 149234 || ||||| | ||||| || || ||||| || ||| ||| |||| Sbjct 539015 AGAGCGTAAAACAGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCA 538956 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | |||||| | || || ||||||||||| | ||| | |||| || || ||| Sbjct 538955 AGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGAATGCACCGGGACGC 538896 Query 149295 TTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||| || ||||||||||| | ||| | ||||||| |||| || | |||||| Sbjct 538895 TTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATG 538836 Query 149352 ATGCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 | ||| || || ||||| || ||| ||| ||||| || || | ||| Sbjct 538835 AGGCCGTTGCTGGTACCGTTGGTGCCAGC-AATATAGCTGCCAGTAGCGCGAATACGGTG 538777 Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469 || |||| |||||| || ||| || ||| || || ||||| ||| | || || Sbjct 538776 GACATTGAGGCCGATACCACCGGCGGTCTTGGAAATCATGGCGCAGGTCTTC-AGGGTAT 538718 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATG 149501 |||||| ||||| |||||||| ||||||| Sbjct 538717 CGTAGATACCCTCAATGCTGTCCTCCTTCATG 538686 >seq95 Length=147769 Score = 167 bits (184), Expect = 2e-36 Identities = 346/507 (68%), Gaps = 15/507 (3%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || ||||| ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 14118 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTC 14177 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | | ||| || | ||| | ||||| || ||||| Sbjct 14178 CATGAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTGCCCAGTGCCACCAGCAG 14237 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACAT-GGACTGCGCGTTCATGCCCAGCAACG 120529 ||||| || || ||||||||||||| || ||| || || ||||||||||| || | | Sbjct 14238 GCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTG-GCGTTCATGCCGAGGAGAG 14296 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTC---CTTGAACA 120586 | || || | || ||||| ||||||||||| || || || ||||| ||| | Sbjct 14297 CGACGGGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGATCT 14356 Query 120587 TGGCGA--GCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 | ||| |||| | ||| |||| || | || |||| ||| | | |||||| Sbjct 14357 TCTCGACGGCAT--CGGGGCTGGGCTTC--GACTT-GATGTGCG---AGAACAGCAGGCA 14408 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 || ||||| || |||| |||||||| || || || |||||||| || || || || Sbjct 14409 AGCGAAGTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACC 14468 Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764 |||||||| ||| | |||| | |||| |||| || ||| || ||||| | Sbjct 14469 GGGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGAT 14528 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 ||||| || ||||| |||| || |||| || || |||| ||||| | ||| Sbjct 14529 ACCCTCGACAGCCGCAAAAGCGATCAGGCGCGATGCGAAAGTCGAGTTCTTGTCGCAGAT 14588 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTT 120851 ||| || |||||| |||||||| || Sbjct 14589 CCAGCGCAGGGCCCAGTCGGCCTTCTT 14615 >seq63 Length=225829 Score = 111 bits (122), Expect = 2e-19 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| || ||| | | | ||||||||||||||||| ||| | || Sbjct 138089 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 138031 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 138030 CAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTC 137971 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||| | || ||| || |||| ||||| ||| ||||| || || || || ||||| Sbjct 137970 GATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 137911 >seq125 Length=94255 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| ||| || ||| |||||| ||||||||||| ||| | Sbjct 36122 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 36063 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 || | ||||||||||| ||||||||||| ||||| || |||||| ||||| | Sbjct 36062 GATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTGACATT 36003 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | ||||| | | ||| || |||| ||||| ||| ||||| |||| Sbjct 36002 GTCGATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 35953 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | ||| ||| |||||| |||||||| || Sbjct 36355 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACC-GTCCTCAAGCTGCTTACC 36297 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 36296 GGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTTGTCCTGGATCTTCGACTT 36237 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | | ||||| |||| |||| || || || || ||||| Sbjct 36236 CACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGAGT 36177 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 36176 CTTGACGAAGATCTGCAT 36159 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || |||||||| || ||| | | | || || | || Sbjct 35851 ATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCA-TCTTCCAACT 35793 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || || ||||||||||| || || |||||||||||||| ||||| Sbjct 35792 GCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCT 35733 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | || || | | ||| || || | ||||| ||| ||||||| Sbjct 35732 TGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGG 35673 Query 133636 T 133636 | Sbjct 35672 T 35672 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| || || || ||||| ||| || ||| |||| ||| || |||||||| | Sbjct 36583 GTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGT--ACGACCGTCTTCCAGCTGCTTAC 36526 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| || || || || ||||| || |||||| || Sbjct 36525 CGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACT 36466 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | ||||| |||| |||| || || || || || | Sbjct 36465 TCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGGG 36406 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 36405 TCTTGACGAAGATCTGCAT 36387 >seq22 Length=487495 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || |||||||| | ||| ||| | ||||| |||||||||| Sbjct 64049 GGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCA-TCCTCAAGCTGCTTGC 63991 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 | ||| |||| | ||||||||||| || || ||||| |||||||| || Sbjct 63990 CAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTGT 63942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483413947510160