Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq12 223 3e-53
seq95 167 2e-36
seq63 111 2e-19
seq125 100 3e-16
seq22 86.0 6e-12
>seq12
Length=708323
Score = 223 bits (246), Expect = 3e-53
Identities = 947/1472 (64%), Gaps = 37/1472 (3%)
Strand=Plus/Minus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109
||||| ||| || ||||| || ||||||||||| ||||| | | || || ||||
Sbjct 540143 GACTGCGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGATGGTACGCTGA 540084
Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169
| ||||||| | |||||||| ||| |||||| | ||| || ||| | ||
Sbjct 540083 GAG---AGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCCGGGATGTTGGGAATT 540027
Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229
|||| | |||||| | |||| || | || ||| | ||||| | || |
Sbjct 540026 TGCTGGATGGAGCCGTTGGAAGCAATGATGCGGTTCTTCATCTGGTCCGACCACAGACCG 539967
Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289
|| |||| |||||| | | || | | || || ||||| ||||| ||||| | ||
Sbjct 539966 AGGTCGACCAGGTCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCACCGGCCAAGACA 539907
Query 148290 CGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348
|| || ||| || | ||| || | || || || |||||||| ||| | ||||||
Sbjct 539906 CGGCG-AGAGTAAATGTTCGAAGTGTAAGGCTCGAAGCACTCGTTGAAGCCAAGAATCTG 539848
Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408
||| | || || |||||| ||| || ||||| |||||||| | |||| | |
Sbjct 539847 ACTGGTAGAGGCAGTAGGCATGGGCGCAACGAGCAGGGAGTTGCGGACACCGTGCTGGGC 539788
Query 148409 TATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467
| | |||||| || | |||||||||| || | || | | |||||||||||
Sbjct 539787 GACCTCAGCCTTCAG-GCTGTCCCAGTCCCACAGGTCAGTGGGGGCCTTGTTCCACATGT 539729
Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527
| |||||||||||||| || ||||||||| |||| | ||| || || |||||
Sbjct 539728 CATACTGCAGAATGCCTTGGGAAGCGGGGCTACCCTGGAACGTCTCATAGGGGCCGTGTT 539669
Query 148528 CCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587
| || || || | || || || ||| ||| || |||||| || ||
Sbjct 539668 GCTTGGCGAGCTCAATGGAGGCAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAA 539609
Query 148588 TGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647
||||||| || ||| ||| | |||||||| || || || || ||||
Sbjct 539608 TGTTGAGGTGCTTGGCCTCAGGAGAATCGAAGGGCATACGAAGAGCCAGGAAAGCATCGG 539549
Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707
| || || | || || || ||||||| || || |||||| | || |||
Sbjct 539548 CGAGACCGTTGACACCAACAGCAATGGGGCGATGGCGCATGTTGCTCCTCCTAGC-CTCC 539490
Query 148708 CGAGCGGA-TAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTA 148766
| ||| ||||||||| |||||||||||||| || || || | ||| | ||
Sbjct 539489 GGCACGGGGTAGTGGTTGATGTCGATGATCTTGTTCAGGTTCTTGACGAGCACTTGAGTG 539430
Query 148767 ATTCTGCGCAGC------AATTCAAAATCG---TACTTGTCATCTACGATGCATCGGTTC 148817
| | ||| || ||| || | | || | ||| || | | | ||
Sbjct 539429 ACATCATGAAGCTTCTTGAAGTCATAAACTCCCTGCTCGACATTGACAAAGG-TAGGA-- 539373
Query 148818 ACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877
| || | || || || ||||| || || |||||| ||||| ||||||| || |||
Sbjct 539372 AGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACAATC 539313
Query 148878 TCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG 148937
||| ||| || ||| || ||| ||| | |||||| || |||||||||| ||||
Sbjct 539312 TCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG 539253
Query 148938 CACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAAC 148997
|| |||||||||||||||| | || |||||| || ||||| | || | |||
Sbjct 539252 CAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCCTCAAGAATGG-- 539195
Query 148998 CGATGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTATAAA 149054
|| ||| | ||| || || || || | || | ||||||||| ||||||
Sbjct 539194 CGTACCAGAGCTTCTGGGCACGAACGGTCT-CACGACCCCGACCCTCCTTCTCGTACTGC 539136
Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114
||||| ||||||| | ||||||||| ||| | ||||| ||||||| || |||
Sbjct 539135 TCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGG 539076
Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174
||||| || | ||| ||||| | | || |||||||| || |||||||| | |||
Sbjct 539075 CACATCAGAGTCCAGGTGCCGTTCTGTTCGACACGCTTCATGAAGAGATCGGGGATCCAC 539016
Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG 149234
|| ||||| | ||||| || || ||||| || ||| ||| ||||
Sbjct 539015 AGAGCGTAAAACAGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCA 538956
Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294
|| | |||||| | || || ||||||||||| | ||| | |||| || || |||
Sbjct 538955 AGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGAATGCACCGGGACGC 538896
Query 149295 TTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351
||| || ||||||||||| | ||| | ||||||| |||| || | ||||||
Sbjct 538895 TTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATG 538836
Query 149352 ATGCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410
| ||| || || ||||| || ||| ||| ||||| || || | |||
Sbjct 538835 AGGCCGTTGCTGGTACCGTTGGTGCCAGC-AATATAGCTGCCAGTAGCGCGAATACGGTG 538777
Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469
|| |||| |||||| || ||| || ||| || || ||||| ||| | || ||
Sbjct 538776 GACATTGAGGCCGATACCACCGGCGGTCTTGGAAATCATGGCGCAGGTCTTC-AGGGTAT 538718
Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATG 149501
|||||| ||||| |||||||| |||||||
Sbjct 538717 CGTAGATACCCTCAATGCTGTCCTCCTTCATG 538686
>seq95
Length=147769
Score = 167 bits (184), Expect = 2e-36
Identities = 346/507 (68%), Gaps = 15/507 (3%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || || ||||| ||||| || ||||| || ||||| | | ||| ||||| |
Sbjct 14118 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTC 14177
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | | ||| || | ||| | ||||| || |||||
Sbjct 14178 CATGAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTGCCCAGTGCCACCAGCAG 14237
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACAT-GGACTGCGCGTTCATGCCCAGCAACG 120529
||||| || || ||||||||||||| || ||| || || ||||||||||| || | |
Sbjct 14238 GCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTG-GCGTTCATGCCGAGGAGAG 14296
Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTC---CTTGAACA 120586
| || || | || ||||| ||||||||||| || || || ||||| ||| |
Sbjct 14297 CGACGGGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGATCT 14356
Query 120587 TGGCGA--GCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644
| ||| |||| | ||| |||| || | || |||| ||| | | ||||||
Sbjct 14357 TCTCGACGGCAT--CGGGGCTGGGCTTC--GACTT-GATGTGCG---AGAACAGCAGGCA 14408
Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704
|| ||||| || |||| |||||||| || || || |||||||| || || || ||
Sbjct 14409 AGCGAAGTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACC 14468
Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764
|||||||| ||| | |||| | |||| |||| || ||| || ||||| |
Sbjct 14469 GGGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGAT 14528
Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824
||||| || ||||| |||| || |||| || || |||| ||||| | |||
Sbjct 14529 ACCCTCGACAGCCGCAAAAGCGATCAGGCGCGATGCGAAAGTCGAGTTCTTGTCGCAGAT 14588
Query 120825 CCACTTCATGGCCCACTCGGCCTTTTT 120851
||| || |||||| |||||||| ||
Sbjct 14589 CCAGCGCAGGGCCCAGTCGGCCTTCTT 14615
>seq63
Length=225829
Score = 111 bits (122), Expect = 2e-19
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| ||| || ||| | | | ||||||||||||||||| ||| | ||
Sbjct 138089 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 138031
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| ||||||||||| || || ||||| |||||||| |||||| ||||| | ||
Sbjct 138030 CAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTC 137971
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| ||||| | || ||| || |||| ||||| ||| ||||| || || || || |||||
Sbjct 137970 GATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 137911
>seq125
Length=94255
Score = 100 bits (110), Expect = 3e-16
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528
||| ||||| || ||||| ||| || ||| |||||| ||||||||||| ||| |
Sbjct 36122 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 36063
Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588
|| | ||||||||||| ||||||||||| ||||| || |||||| ||||| |
Sbjct 36062 GATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTGACATT 36003
Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
|| | ||||| | | ||| || |||| ||||| ||| ||||| ||||
Sbjct 36002 GTCGATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 35953
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || | ||| ||| |||||| |||||||| ||
Sbjct 36355 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACC-GTCCTCAAGCTGCTTACC 36297
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || ||||| || |||||||| |||||| |||
Sbjct 36296 GGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTTGTCCTGGATCTTCGACTT 36237
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | | ||||| |||| |||| || || || || |||||
Sbjct 36236 CACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGAGT 36177
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 36176 CTTGACGAAGATCTGCAT 36159
Score = 95.1 bits (104), Expect = 1e-14
Identities = 131/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || |||||||| || ||| | | | || || | ||
Sbjct 35851 ATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCA-TCTTCCAACT 35793
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || ||||||||||| || || |||||||||||||| |||||
Sbjct 35792 GCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCT 35733
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | || | || || | | ||| || || | ||||| ||| |||||||
Sbjct 35732 TGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGG 35673
Query 133636 T 133636
|
Sbjct 35672 T 35672
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|| ||||| || || || ||||| ||| || ||| |||| ||| || |||||||| |
Sbjct 36583 GTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGT--ACGACCGTCTTCCAGCTGCTTAC 36526
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| ||||||||||| || || || || ||||| || |||||| ||
Sbjct 36525 CGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACT 36466
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | || || | | ||||| |||| |||| || || || || || |
Sbjct 36465 TCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGGG 36406
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 36405 TCTTGACGAAGATCTGCAT 36387
>seq22
Length=487495
Score = 86.0 bits (94), Expect = 6e-12
Identities = 86/109 (79%), Gaps = 2/109 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || |||||||| | ||| ||| | ||||| ||||||||||
Sbjct 64049 GGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCA-TCCTCAAGCTGCTTGC 63991
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570
| ||| |||| | ||||||||||| || || ||||| |||||||| ||
Sbjct 63990 CAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTGT 63942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483413947510160
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