Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 154 1e-32 seq125 93.3 4e-14 seq95 87.8 2e-12 >seq12 Length=708323 Score = 154 bits (170), Expect = 1e-32 Identities = 721/1133 (64%), Gaps = 19/1133 (2%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 ||||| || || ||||| || |||| ||||| | |||| || | || |||| |||| Sbjct 539936 TTGACGACCTGGAACTCACCGGCCAAGACACGGC-GAGAGTAAATGTTCGAAGTGTAAGG 539878 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| || |||| || ||| | || || || | || ||||||||| ||| || Sbjct 539877 CTCGAAGCACTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAAC 539818 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 | || || || || | ||||| | || | |||||| | | ||||||||| Sbjct 539817 GAGCAGGGAGTTGCGGACACCGTGCTGGGCGACCTCAGCCTTCAGGCTGTCCCAGTCCCA 539758 Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131 || | ||| | | |||||||||||| ||||| || | ||| | ||||| || Sbjct 539757 CAGGTCAGTGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCT 539698 Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGC 147191 || |||||| ||| |||| ||| || | ||| | || || || Sbjct 539697 ACCCTGGAACGTCTCATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAGGCAGTAAGAGC 539638 Query 147192 TCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTA 147251 | | ||| ||||| ||| ||| || |||| ||| | || || ||| | Sbjct 539637 AGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCCTCAGGAGAATCGAA 539578 Query 147252 AGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCG 147311 |||||||| ||| || || |||||||| | ||| | || ||| || | || || || Sbjct 539577 GGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCAACAGCAATGGGGCG 539518 Query 147312 ATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTT 147371 ||| |||||| | | | || || | ||| ||||||||| || || ||||| Sbjct 539517 ATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCTT 539458 Query 147372 GTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCC 147431 ||| ||||| || | |||| ||| | | || |||| ||| |||||| || Sbjct 539457 GTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTCC 539398 Query 147432 GTCTTCGACACGTACGCATTGGTTC--ACGGCGATAGACGCCAGATTGCAGACGGCCGTC 147489 | |||||| || | ||| | || | || || || |||||||| || | Sbjct 539397 CTGCTCGACATTGACAAA--GGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACC 539340 Query 147490 TCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCC 147549 || || | | | |||||| || || ||| ||| |||||| || ||| || Sbjct 539339 TCATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCA 539280 Query 147550 AAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCG 147609 | || | ||| ||||| || || ||||| ||| ||| | |||||| | || ||| Sbjct 539279 AGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCA 539220 Query 147610 GTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGTCCTGCGCTCGCACCCGCTGCCG 147668 |||||||| || | |||| || | || || | ||| || || || || || Sbjct 539219 GTCTCGACCTGAGCCTCAAGAATGG-CGTACCAGAGCTTCTGGGCACGAACGGTCTCACG 539161 Query 147669 ATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATC 147728 | || ||||| || |||||| ||||||||| ||| ||||||||||||||| || Sbjct 539160 ACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTC 539101 Query 147729 GGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCG 147788 |||||| || || |||| | || |||||||| | ||| || ||| | | || || Sbjct 539100 GGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACG 539041 Query 147789 TCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTC 147848 ||| || ||||| || | |||||| ||||| | || || || || || | |||| Sbjct 539040 CTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAGC---GCGAACCTC 538984 Query 147849 GGC--GCCCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTT 147904 | || || | | || | | | ||| | ||| ||| ||||| ||||| || | Sbjct 538983 TTCCTTTCCGTGGTTC-TTGCGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCT 538925 Query 147905 CAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCACCA 147961 | | ||| | ||| | ||||| |||| || || ||||||||||||| ||| | Sbjct 538924 CGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGG 538865 Query 147962 TGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014 ||||||| |||| || | ||| || |||||| | || ||||||||| Sbjct 538864 TGTTGTTGTACACACGGAGCATAGGAATGAGGCCGTTGCTGGTACCGTTGGTG 538812 >seq125 Length=94255 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||||||||||||| || ||||| ||||| ||||| ||||||| Sbjct 36580 GACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACCGTCTTCCAGCTGCTTACCGGCG 36521 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || || || || || || ||||| || || |||| Sbjct 36520 AAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTCACG 36461 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | | ||||| |||| ||| | || || ||||| || || || Sbjct 36460 TTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTG 36401 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 36400 ACGAAGATCTGCAT 36387 >seq95 Length=147769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117 ||||| |||||||| | || | || || |||||||| | || ||||||||||| || Sbjct 14333 ATCGAGAAGGAGTTCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGC-CAA 14275 Query 47118 TC-TATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC- 47175 || |||| || | || |||||||| || || || || ||| ||||| || || |||| Sbjct 14274 TCTTATGCGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCACT-GGGCAACA 14216 Query 47176 CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235 ||| | | || | || || || || || ||| | ||||| ||||| | |||| Sbjct 14215 AGAAGTTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCA 14156 Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | ||||| || |||||||| || || || || || Sbjct 14155 AGACCAACTTCTTCGAGAAGCGCGTTGGTGACTA 14122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476604444036240