Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq12 154 1e-32
seq125 93.3 4e-14
seq95 87.8 2e-12
>seq12
Length=708323
Score = 154 bits (170), Expect = 1e-32
Identities = 721/1133 (64%), Gaps = 19/1133 (2%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951
||||| || || ||||| || |||| ||||| | |||| || | || |||| ||||
Sbjct 539936 TTGACGACCTGGAACTCACCGGCCAAGACACGGC-GAGAGTAAATGTTCGAAGTGTAAGG 539878
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| || |||| || ||| | || || || | || ||||||||| ||| ||
Sbjct 539877 CTCGAAGCACTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAAC 539818
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071
| || || || || | ||||| | || | |||||| | | |||||||||
Sbjct 539817 GAGCAGGGAGTTGCGGACACCGTGCTGGGCGACCTCAGCCTTCAGGCTGTCCCAGTCCCA 539758
Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131
|| | ||| | | |||||||||||| ||||| || | ||| | ||||| ||
Sbjct 539757 CAGGTCAGTGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCT 539698
Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGC 147191
|| |||||| ||| |||| ||| || | ||| | || || ||
Sbjct 539697 ACCCTGGAACGTCTCATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAGGCAGTAAGAGC 539638
Query 147192 TCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTA 147251
| | ||| ||||| ||| ||| || |||| ||| | || || ||| |
Sbjct 539637 AGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCCTCAGGAGAATCGAA 539578
Query 147252 AGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCG 147311
|||||||| ||| || || |||||||| | ||| | || ||| || | || || ||
Sbjct 539577 GGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCAACAGCAATGGGGCG 539518
Query 147312 ATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTT 147371
||| |||||| | | | || || | ||| ||||||||| || || |||||
Sbjct 539517 ATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCTT 539458
Query 147372 GTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCC 147431
||| ||||| || | |||| ||| | | || |||| ||| |||||| ||
Sbjct 539457 GTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTCC 539398
Query 147432 GTCTTCGACACGTACGCATTGGTTC--ACGGCGATAGACGCCAGATTGCAGACGGCCGTC 147489
| |||||| || | ||| | || | || || || |||||||| || |
Sbjct 539397 CTGCTCGACATTGACAAA--GGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACC 539340
Query 147490 TCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCC 147549
|| || | | | |||||| || || ||| ||| |||||| || ||| ||
Sbjct 539339 TCATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCA 539280
Query 147550 AAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCG 147609
| || | ||| ||||| || || ||||| ||| ||| | |||||| | || |||
Sbjct 539279 AGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCA 539220
Query 147610 GTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGTCCTGCGCTCGCACCCGCTGCCG 147668
|||||||| || | |||| || | || || | ||| || || || || ||
Sbjct 539219 GTCTCGACCTGAGCCTCAAGAATGG-CGTACCAGAGCTTCTGGGCACGAACGGTCTCACG 539161
Query 147669 ATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATC 147728
| || ||||| || |||||| ||||||||| ||| ||||||||||||||| ||
Sbjct 539160 ACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTC 539101
Query 147729 GGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCG 147788
|||||| || || |||| | || |||||||| | ||| || ||| | | || ||
Sbjct 539100 GGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACG 539041
Query 147789 TCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTC 147848
||| || ||||| || | |||||| ||||| | || || || || || | ||||
Sbjct 539040 CTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAGC---GCGAACCTC 538984
Query 147849 GGC--GCCCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTT 147904
| || || | | || | | | ||| | ||| ||| ||||| ||||| || |
Sbjct 538983 TTCCTTTCCGTGGTTC-TTGCGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCT 538925
Query 147905 CAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCACCA 147961
| | ||| | ||| | ||||| |||| || || ||||||||||||| ||| |
Sbjct 538924 CGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGG 538865
Query 147962 TGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014
||||||| |||| || | ||| || |||||| | || |||||||||
Sbjct 538864 TGTTGTTGTACACACGGAGCATAGGAATGAGGCCGTTGCTGGTACCGTTGGTG 538812
>seq125
Length=94255
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct 36580 GACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACCGTCTTCCAGCTGCTTACCGGCG 36521
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || || || || || || ||||| || || ||||
Sbjct 36520 AAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTCACG 36461
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | | ||||| |||| ||| | || || ||||| || || ||
Sbjct 36460 TTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTG 36401
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 36400 ACGAAGATCTGCAT 36387
>seq95
Length=147769
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117
||||| |||||||| | || | || || |||||||| | || ||||||||||| ||
Sbjct 14333 ATCGAGAAGGAGTTCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGC-CAA 14275
Query 47118 TC-TATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC- 47175
|| |||| || | || |||||||| || || || || ||| ||||| || || ||||
Sbjct 14274 TCTTATGCGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCACT-GGGCAACA 14216
Query 47176 CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235
||| | | || | || || || || || ||| | ||||| ||||| | ||||
Sbjct 14215 AGAAGTTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCA 14156
Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
| ||||| || |||||||| || || || || ||
Sbjct 14155 AGACCAACTTCTTCGAGAAGCGCGTTGGTGACTA 14122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476604444036240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |