Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq95 87.8 2e-12 >seq95 Length=147769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| |||||| | || | ||| ||||| || ||||| ||||| Sbjct 14837 GCTCGACAAGGTTCTCGTTGACGATGCCATCAGAGGCGGCGAAGAAAGCGAGGACGTGGG 14896 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | |||||| || ||||||||||| | || ||||||||| | Sbjct 14897 AGATGAAGAAGCGCTCATCGTCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGA 14956 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||||| || || ||||| | | | | |||||||||||| |||| |||| Sbjct 14957 GATCGATCTCCTCAGCCGTCCAGAAAGAGGCTTCAGCCTTCTTGTACATCTGCC--AGAT 15014 Query 110892 CT 110893 || Sbjct 15015 CT 15016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445088090786880