Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq125 122 8e-23
seq63 93.3 4e-14
>seq125
Length=94255
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||||||||||||||| |||| |
Sbjct 36613 CCACCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAC 36554
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||||||||||||| || || || | ||||||||||||| |||
Sbjct 36553 AGCGTACGACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 36494
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||| ||| |||||| ||||| | | | || || |||||||||
Sbjct 36493 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36434
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | |||||| || || || || | || || || || ||||||||
Sbjct 36433 TCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || |||||| || | || |||||| || |||||||| || |
Sbjct 36385 CCACCACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAG 36326
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| || ||||||||||| || || |||| ||||||||||||| ||
Sbjct 36325 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 36266
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||||| |||||| ||||| | | | || || |||||||||
Sbjct 36265 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36206
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | |||||| || || || || | ||| || || || ||||||||
Sbjct 36205 TCGAGCGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 109 bits (120), Expect = 5e-19
Identities = 129/175 (74%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| |||| || ||| || |||| || |||||||| ||
Sbjct 36127 GTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 36068
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
|| || ||||| ||||||||||||| ||| | || |||||| ||| |||||| |||
Sbjct 36067 GCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTG 36008
Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
| | | | | ||||| ||| || ||||| | ||||| || || || ||||
Sbjct 36007 ACATTGTCGATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 35953
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | || ||| || | || |||| |||||| || || ||
Sbjct 35839 CTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAA 35780
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|| | ||||||||||||| |||| || ||||||||| ||||||
Sbjct 35779 GATAAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTT 35732
>seq63
Length=225829
Score = 93.3 bits (102), Expect = 4e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| |||| || ||| || | || || |||||||| || || || |
Sbjct 138091 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138032
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||||| |||| || |||||||||| |||||| ||| | | |
Sbjct 138031 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 137972
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||| || || ||||| | ||||| || || |||||
Sbjct 137971 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 137926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450787210000720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |