Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq125 105 7e-18 seq22 93.3 4e-14 seq63 87.8 2e-12 >seq125 Length=94255 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | ||| || ||||| ||||| || ||||||||||| | ||| || Sbjct 36376 AGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGA 36317 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| || || || || |||| ||||||||| || ||||| || || || Sbjct 36316 CCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCC 36257 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | || || || |||||||| ||||| || Sbjct 36256 TTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTG 36197 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||| || ||||| || ||||| Sbjct 36196 ATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||| ||||| || |||||||||||| | |||| | ||| || Sbjct 36139 ACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCA 36080 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || ||||| |||||||| || || || ||||| || || || || Sbjct 36079 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGG 36020 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| ||||| || || ||||| || ||||| || Sbjct 36019 ATCTTCGACTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTG 35960 Query 134685 CCGGT 134689 || || Sbjct 35959 CCAGT 35955 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || || ||||||||||||||||||||| Sbjct 36613 CCACCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAC 36554 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| || ||||| || || || || || | ||||||||| || || || Sbjct 36553 AGCGTACGACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 36494 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || || | || || || |||||||| Sbjct 36493 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36434 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| || ||||| Sbjct 36433 TCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387 >seq22 Length=487495 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||||| ||||| || |||||||| || || ||| || Sbjct 64069 AGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGA 64010 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||||||||||||||| || || || ||||| || Sbjct 64009 CCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATGCCCTCC 63950 Query 134616 TTTTCT 134621 || ||| Sbjct 63949 TTGTCT 63944 >seq63 Length=225829 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| | || |||||||| ||||| || || | Sbjct 138091 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138032 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 138031 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 137972 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || ||||| || ||||| || || || | || || |||| Sbjct 137971 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 137912 Query 134704 A 134704 | Sbjct 137911 A 137911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505391235977680