Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq14 102 6e-17
>seq14
Length=610896
Score = 102 bits (112), Expect = 6e-17
Identities = 224/333 (67%), Gaps = 11/333 (3%)
Strand=Plus/Plus
Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500
|| ||||||||| |||| ||||||| ||| ||||| || || || ||| | || |
Sbjct 548527 AACGGTCCTGAAGTCTTGAATAAATTTGTTGGTCAGTCAGAGGAGAATATCCGGAAGCTC 548586
Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTAT 19559
|| || ||||| || | || || ||| | |||||| | | || ||||| |||||
Sbjct 548587 TTCGCCGACGCGGAGAAGGAGCAGAAA-GAGAAGGGCGACGAGAGCGGCTTGCATATTAT 548645
Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------CTGGTGTA---AA 19610
|| | ||||| | || || | || ||||| |||||| |||||| |
Sbjct 548646 CATCTTCGATGAGCTTGATGCTGTGTGCAAGCAGAGAGGTAGCGGTGCTGGTGGCGGCAC 548705
Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670
|||||| ||||| ||||||||| ||||| |||| ||| | |||||||| | || ||
Sbjct 548706 TGGAGTGGGTGACAGTGTTGTCAACCAACTTTTGTCGAAACTCGACGGTGTCGAGCAGCT 548765
Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730
||| || || | | ||||||||||| ||| | | || | || || ||| | ||
Sbjct 548766 GAACAACATCCTTCTCATTGGCATGACCAATCGGATCGACATCATCGATGAAGCCCTCTT 548825
Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAAT 19763
| || || || |||||||| || | |||||
Sbjct 548826 GAGGCCTGGGCGCTTGGAAATCCAGCTTGAAAT 548858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397450506909670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |