Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq95 109 2e-18
seq12 89.7 2e-12
>seq95
Length=147769
Score = 109 bits (120), Expect = 2e-18
Identities = 121/160 (76%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767
||| || |||||||||| | ||||| || | || || || || | | || || ||||
Sbjct 14559 GCGCCTGATCGCTTTTGCGGCTGTCGAGGGTATCTTCTTCAGTGG-ATCCTTCGCTTCCA 14501
Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827
|||||||| |||| |||||||| || |||| |||||| || || |||||| || |||
Sbjct 14500 TCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCATCT 14441
Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| ||||||||| ||||| ||||||||| || || ||
Sbjct 14440 CTCGTGACGAGGGTATGCATACCGACTTCGCTTGCCTGCT 14401
>seq12
Length=708323
Score = 89.7 bits (98), Expect = 2e-12
Identities = 213/319 (67%), Gaps = 6/319 (2%)
Strand=Plus/Plus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
|||| | || || ||| ||||||||| ||||||| || ||||| ||||| || || ||
Sbjct 538830 CGGCCTCATTCCTATGCTCCGTGTGTACAACAACACCGCCCGCTATGTCGACCAGGGTGG 538889
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090
| ||| || || || || ||| |||| ||||| ||||||||||| ||||| | |
Sbjct 538890 CAACAAGCGTCCCGGTGCATTCGCCATTTACCTCGAGCCGTGGCATGCCGATGTCTTCAG 538949
Query 255091 GTTTTTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATCTA 255147
|| | || |||| ||||| ||| | || ||| | ||| || ||| | |
Sbjct 538950 CTTCCT--TGACCTCCG-CAAGAACCACGGAAAGGAAGAGGTTCGCGCTCGTGACCTGTT 539006
Query 255148 CACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAG 255207
|||| | ||| | |||||| || ||| || || |||| ||| |||||||
Sbjct 539007 TTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAACAGAACGGCACCTGGAC 539066
Query 255208 CCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAA 255267
|| ||||| |||||| | || ||||| | |||| | || |||||||| ||
Sbjct 539067 TCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGACGAGTTCGAGGC 539126
Query 255268 ACTGTATCTGGAGTACGAG 255286
||||| | ||||||||
Sbjct 539127 TCTGTACGAGCAGTACGAG 539145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588312922470630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |