Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq12 165 1e-35
seq95 111 2e-19
seq3 96.9 4e-15
>seq12
Length=708323
Score = 165 bits (182), Expect = 1e-35
Identities = 815/1279 (64%), Gaps = 30/1279 (2%)
Strand=Plus/Minus
Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCAT 118252
||||| ||||| |||||||| ||| | |||||| | | ||| | ||||| || |||||
Sbjct 539885 GTGTAAGGCTCGAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTAGAGGCAGTAGGCAT 539827
Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312
||| || | ||| ||| ||| |||| ||| | | | |||| || |||
Sbjct 539826 GGGCGCAACGAGCAGGGAGTTGCGGACACCGTGCTGGGCGACCTCAGCCTTCAGGCTGTC 539767
Query 118313 CCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370
|||||| | | | || | | || | |||||| ||| |||| || || ||||||
Sbjct 539766 CCAGTCCCACAGGTCAG--TGGGGGCCTTGTTCCACATGTCATACTGCAGAATGCCTTGG 539709
Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC---GGAG 118427
|| || || |||| || |||||||| ||||| | || || | || ||||
Sbjct 539708 GAAGCGGGGCTACCCTGGAACGTCTCATAGGGGCCGTGTTGCTTGGCGAGCTCAATGGAG 539649
Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487
|| || || ||||| || || || || || || || || | |||||||
Sbjct 539648 ---GCAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGGTGCTTGGCC 539592
Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547
|| ||||| || | | || | || |||| |||||||| | ||||||
Sbjct 539591 TCAGGAGAATCGAAGGGCATACGAAGAGCCAGGAAAGCATCGGCGAGACCGTTGACACCA 539532
Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTC 118607
| |||| |||||||| | ||| || | ||| ||| | |||||| || ||
Sbjct 539531 ACAGCAATGGGGCGATGGCGCATGTTGCTCCTCCTAGCCTCCGGCACGGGGTAGTGGTTG 539472
Query 118608 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 118667
| ||||| | | | || || || ||| || || | |||| ||||||||||| | |
Sbjct 539471 ATGTCGATGATCTTGTTCAGGTTCTTGACGAGCACTTGAGTGACATCATGAAGCTTCTTG 539412
Query 118668 TAATCA-AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 118726
| ||| ||||| | | ||| |||||||| | ||||||| || | || || || ||
Sbjct 539411 AAGTCATAAACTCCCTG-CTCGACATTGACAAAGGTAGGAAGTGCCAGGGATGCAAGGTT 539353
Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786
|| |||| | |||||| |||||||||| | ||| || ||| | ||| || ||
Sbjct 539352 GCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACAATCTCGCAGCAGAGGTTGGAGCT 539293
Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846
|||||||| | |||||| || || ||| ||| || |||||||| |||||
Sbjct 539292 GCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCAT 539233
Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTG 118905
| | || | || ||||| || | || ||||| || | ||||| | || | ||
Sbjct 539232 GAAGGGGTTGCCAGTCTCGACCTGAGCCTCAAGAATGGCGTACCAGAGCTTCTG-GGCAC 539174
Query 118906 GCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 118965
| || || | | || ||||| | |||||||| ||| || || || ||||| |
Sbjct 539173 GAACGGTCTCACGACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGT 539114
Query 118966 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 119025
| || | | || | || || || || | ||||| | |||| ||| ||
Sbjct 539113 CGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGT 539054
Query 119026 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 119085
|| || || |||||||||||||| || |||||||| || || | || || || |||
Sbjct 539053 TCTGTTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAAAACAGGTCACGAG 538994
Query 119086 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 119145
|||| | ||||| | || || || || | || | ||| | || ||| || |
Sbjct 538993 CGCGAACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAAGCTGAAGACATCGGCAT 538934
Query 119146 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACAT 119202
||||||| || ||||| | |||| || || ||| ||| |||||| ||||
Sbjct 538933 GCCACGGCTCGAGGTAAATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCGACAT 538874
Query 119203 ACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGG--CCATT 119260
| | || ||| ||| | ||||| ||||| ||||||| || | | ||| || ||
Sbjct 538873 AGCGGGCGGTGTTGTTGTACACACGGAGCATAGGAATGAGGCCGTTG--CTGGTACCGTT 538816
Query 119261 TGTCCCCCGAATACGAGACT--TATTGGCTCTGACATCGTGGATGTGCATACCAATACCC 119318
|| || |||| || || | | || | | | ||||| | | || |||||
Sbjct 538815 GGTGCCAGCAATA-TAG-CTGCCAGTAGCGCGAATACGGTGGACATTGAGGCCGATACCA 538758
Query 119319 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 119378
|| || ||| || || ||||| | | || | ||||||| || || || |
Sbjct 538757 CCGGCGGTCTTGGAAATCATGGCGCAGGTCTTCAGGGTATCGTAGATACCCTCAATGCTG 538698
Query 119379 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTG 119438
|| |||| | |||||||||||||| | || |||||| |||| ||||| ||||||
Sbjct 538697 TCCTCCTTCATGTCGATGAGGAAGCAGGAAGCCAGCTGAGGCTTGGGAGTACCGGCGTTG 538638
Query 119439 AAGAGAGTTGGTGTCGCGT 119457
|||||| | ||||||||
Sbjct 538637 AAGAGA---GCTGTCGCGT 538622
>seq95
Length=147769
Score = 111 bits (122), Expect = 2e-19
Identities = 348/525 (66%), Gaps = 32/525 (6%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786
||||| ||||| ||||||||||||||||| ||||| |||| |||| ||| ||||||||
Sbjct 14122 TAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTT-AAGCGAGATGTTCTCCAT 14180
Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAG 129840
|| || || ||||| | ||||| | | ||| || | | | | | | ||
Sbjct 14181 GAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTGTTGCCCAGTGCCACC------AG 14234
Query 129841 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG 129900
|| || || | |||| |||||||||||| ||| | || |||||| |||| |||
Sbjct 14235 CAGGCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGCGTTCATGCCGAGGAG 14294
Query 129901 -GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGA 129959
| || || || || ||| || |||| ||||||| || || || || || | ||
Sbjct 14295 AGCGACG-GGAAGGGCATCCGTGAGGAACTCCTTCTCGATATCTACGGCCTCGGTGATGA 14353
Query 129960 TGGCGTGAATGGTCTCCGTGCCAGG--TCTA-TTGCGCAAAGT-CTTGAAGAGTTCCACG 130015
| | | || || | || || || | ||| | || | ||| || || |
Sbjct 14354 TCTTCTCGACGGCATCGGGGCTGGGCTTCGACTTG----ATGTGCGAGAACAG---CAGG 14406
Query 130016 ---GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGA 130072
|| || || || | |||||||||||| |||||||| || || ||||| |||
Sbjct 14407 CAAGCGAAGTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGA 14466
Query 130073 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 130132
|| |||||||| || |||||||||| |||||| || | | || || ||| |||||||
Sbjct 14467 CCGGGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAG 14526
Query 130133 ATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA 130192
|| ||||| ||| ||| || || | || ||| || || | || | |||| ||
Sbjct 14527 ATACCCTCGACAGCCGCAAAAGCGATCAGGCGCGATGCGAAAG-TCGAGTTCTTGTCGCA 14585
Query 130193 -AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236
| ||| || ||||| | ||||| |||| |||||| || ||
Sbjct 14586 GATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATACAAGGAAC 14630
>seq3
Length=900425
Score = 96.9 bits (106), Expect = 4e-15
Identities = 217/321 (68%), Gaps = 4/321 (1%)
Strand=Plus/Plus
Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAAC 14292
||| |||| ||||| |||||||| ||||| | ||| || || | | | || ||
Sbjct 850780 CTTGCCGATAGCGTCGATTTCATCAATGAAGATGATGCAGGGGGTACTCTTCCGCGCTGT 850839
Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 14352
| |||| | |||||| ||||| || ||| ||||| || ||||||||||| || | ||
Sbjct 850840 TGCAAACAAATCTCGTACTCTGGAGGGACCAACACCGACGAACATCTCCACGAACTCGGA 850899
Query 14353 GGCG-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411
| || ||| | || |||||| || | |||||||| || |||| || || || |
Sbjct 850900 GCCGCTAACGCT-GAAGAAGGGCACCTGGGATTCACCGGCAGTGGCCTTAGCAAGCAGCG 850958
Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC-ACTG 14470
|||| || || || || || | ||| | ||| ||||| || || ||||||| | |
Sbjct 850959 TCTTGCCAGTACCAGGAGGACCAGAGAGGATGGCGCCACGAGGAATTTTGGCACCAAGTT 851018
Query 14471 CCAAAGTAGCGTTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTCGCG 14530
| | || | |||||| || |||||| |||| ||| | ||| | ||||||
Sbjct 851019 TCTGA-TACACTCCAGGTTCCTTGAGGAAGCTGACGAATTCCATGATTTCTTGCTTCGCC 851077
Query 14531 GCGTCGATGCCTTCAACGTCA 14551
|||| || || ||||||||
Sbjct 851078 TCGTCCATCCCGGCAACGTCA 851098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618426433681040
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