Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq12 165 9e-36
seq125 161 1e-34
seq63 131 2e-25
seq22 102 9e-17
seq76 98.7 1e-15
seq41 84.2 2e-11
>seq12
Length=708323
Score = 165 bits (182), Expect = 9e-36
Identities = 732/1138 (64%), Gaps = 52/1138 (5%)
Strand=Plus/Minus
Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600
||||||||| | ||||| ||||| | || || || ||| ||||||||| || ||
Sbjct 539736 CCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCTACCCTGGAACGTCTCATAGGG 539677
Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660
||| | |||||| |||||| || | |||| || ||||| || ||| ||| ||
Sbjct 539676 GCCGTGTTGCTTGGCGAGCTCAATGGAGGCAGTAAGAGCAGCGTGGTAGATGGTCTCGAA 539617
Query 80661 GACGCCCTTGTTCACACCGCGC---GCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717
|| |||| | | || |||| || ||||| | || | | ||
Sbjct 539616 GATCTGAATGTTGAG---GTGCTTGGCCTCAGGAGAATCGAAGGGCATACGAAGAGCCAG 539560
Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777
||| | || || || || | || || | || || ||||| |||||| |||| | ||
Sbjct 539559 GAAAGCATCGGCGAGACCGTTGACACCAACAGCAATGGGGCGATGGCGCATGTT-GCTC- 539502
Query 80778 CTCG--GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835
||| |||||||| | ||||| ||| | ||||||| ||||||||| | ||
Sbjct 539501 CTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCTTGTTCAGGTT-CTTGAC 539443
Query 80836 -ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTCAC 80888
| || | || ||||||||||| |||| ||||| | || | | || ||
Sbjct 539442 GAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTCCCTGCTCGACATTGAC 539383
Query 80889 AAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAA 80948
||| | ||||| |||||| || || ||||| || || ||||| |||| | || |
Sbjct 539382 AAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTGTA 539323
Query 80949 CTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGA 81008
|||||| || || ||| | || || || || || ||||| ||||||||
Sbjct 539322 CTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCT 539263
Query 81009 CTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTT 81068
|||| |||||| ||||||||| |||| | ||| | || ||||||||||| | ||
Sbjct 539262 CTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCCTC 539203
Query 81069 GAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCAC 81128
|| ||||||| ||| | || | || || || || || || | |
Sbjct 539202 AAGAATGGCGTACCAGAGCTTCTGGGCACGAACGGTCTCACGACCCCGACCCTCCTTCTC 539143
Query 81129 ATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTC 81188
|||| |||| | ||||||| | | |||| | || | || | ||||||||
Sbjct 539142 GTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCACTC 539083
Query 81189 GTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCGTC 81245
||| ||||||||||| ||| |||| ||||| || ||| ||||||||| ||
Sbjct 539082 GTTGGGGCACATCAGAGTCCA---GGTGCCGTTCTGTTCGACACGCTTCATGAAGAGATC 539026
Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTG 81303
|||||||| || ||| |||||||| || |||||| |||| || | || |||||
Sbjct 539025 GGGGATCCACAGAGCGTAAAACAGGTCACG--AGCGCGAACCTCTTCCTTTCCGTGGTTC 538968
Query 81304 AGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATC 81363
||| | || || ||| | || || |||||||| ||||| || || | |||||
Sbjct 538967 TTGCGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGAAT 538908
Query 81364 GACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417
| || | |||| ||||||||||| ||| || ||||| || ||| | |||
Sbjct 538907 GCACC---GGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACA 538851
Query 81418 CGCAACATAGGGATGATACCATCTGACTG--ACCGTTCGTACCCACGATA-CGCGACCCC 81474
|| | |||||| |||| || | || ||| |||||| || || | ||| || ||
Sbjct 538850 CGGAGCATAGGAATGAGGCCGT-TG-CTGGTACCGTTGGTGCCAGCAATATAGCTGCCAG 538793
Query 81475 TTG-GCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533
| | ||| || || |||| || ||||| ||||| | ||| |||||| ||
Sbjct 538792 TAGCGCGAATACGGTGGACATTG--AGGCCGATACCACCGGCGGTCTTGGAAATCATGGC 538735
Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593
|| |||| ||| || || || ||||| ||||| || | |||||||| | | |||
Sbjct 538734 GCAGGTCTTCAGGGTATCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAA 538675
Query 81594 ACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGT 81649
||| | || |||||| || ||| ||||| ||||| || | | |||||||
Sbjct 538674 GCAGGAAGCCAGCTGAGG--CTTGGGAGTACCGGCGTTGAAGAGAGCT---GTCGCGT 538622
Score = 89.7 bits (98), Expect = 6e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || || |||||||||||||| |||||||| || |||||| ||| | ||||
Sbjct 540251 GCCTGGGTACGGAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGC 540192
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| || ||| ||| | | || || | || |||| ||||| || ||||| ||||||
Sbjct 540191 ATGGAGGTGATCTTGCCCATCGTAGGATCCTTCATGTGAATGTTGAGGGACTGCGACTGA 540132
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCAT 80180
|||||| || ||||| || || |||||
Sbjct 540131 TCGATGAAGGCACCACGGTCAGCAGCCAT 540103
>seq125
Length=94255
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || || |||||||| || || ||||| || ||
Sbjct 36159 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36218
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||| | || || |||||||||||||| || || || ||||||
Sbjct 36219 GATACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGACCAG 36278
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || |||||||| || ||||| | ||| || || | ||||| ||
Sbjct 36279 CAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCGGACTACAAC 36338
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || | || |||||||||| |||||
Sbjct 36339 ATCCAGAAGGAGTCCACACTCCACTTGGTGCTGCGTCTTCGTGGTGG 36385
Score = 154 bits (170), Expect = 2e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || || |||||||| || || ||||| || ||
Sbjct 36387 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36446
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||| | || || ||||| |||||||| ||||| || ||||||
Sbjct 36447 GATACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAG 36506
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || |||||||| || || || | |||||| || | ||||| ||
Sbjct 36507 CAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGACGGTCGTACGCTGTCCGACTACAAC 36566
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| |||||||| || ||||| || | || | ||||| || ||||| ||
Sbjct 36567 ATTCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGTGGCCA 36616
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || |||||||| ||||| |||| ||| | || | |||
Sbjct 35672 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACCATCGACAACGTCAAGAGC 35731
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||||||||| || ||||| || ||||||||||| || || || || || |||
Sbjct 35732 AAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGCAAG 35791
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| | || |||| || ||||| | || || || |||| ||||| || || ||||||
Sbjct 35792 CAGTTGGAAGATGGCCGCACCCTGTCGGATTACAACATCCAGAAGGAGTCGACCCTTCAT 35851
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || ||||||||
Sbjct 35852 CTCGTCCTCCGCCTGCGCGGTGG 35874
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || || ||||| ||||| ||| | ||| | ||| | ||| |
Sbjct 35955 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCTGACACCATCGACAATGTCAAGTCG 36014
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| |||||||| || ||||| ||||||||||| | || || ||||| |||
Sbjct 36015 AAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 36074
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | || ||||| | ||||| || |||| ||||| |||||| ||
Sbjct 36075 CAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAC 36134
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || ||||| |||||
Sbjct 36135 CTCGTCCTCCGCCTTCGTGGTGG 36157
>seq63
Length=225829
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || || ||||| ||||| ||| | |||
Sbjct 137910 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCAT 137969
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| || || |||||||||||||| ||||| || ||||||||||| ||
Sbjct 137970 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 138029
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| |||||||||| || ||||| | ||||| || |||| ||
Sbjct 138030 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 138089
Query 27594 GG 27595
||
Sbjct 138090 GG 138091
>seq22
Length=487495
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| ||||| || |||||||||||| | ||||| ||||| ||||| || |||
Sbjct 63945 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAG 64004
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| ||| || || | || || || |||| ||||| ||||| ||||| || || |
Sbjct 64005 GATGGTCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 64064
Query 27619 CGTCTTCGCGGTGG 27632
|| || || || ||
Sbjct 64065 CGCCTGCGTGGCGG 64078
>seq76
Length=193090
Score = 98.7 bits (108), Expect = 1e-15
Identities = 269/412 (65%), Gaps = 0/412 (0%)
Strand=Plus/Plus
Query 31991 TCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACA 32050
||||||| || ||||||||| | ||| | ||| |||||| ||||||| | ||||
Sbjct 122249 TCAAGCCAGGTCAACGCAAGGTGCTCTACACTTGCTTCAAGAGGAACCTGAAAAAGGACA 122308
Query 32051 TGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGG 32110
| ||||| | || | |||| ||| | || | ||| ||| | |||| || |
Sbjct 122309 TCAAGGTCAACGAACTTGCCGGCTTCGTTGGAGGTCTAACCAACTACGCCTACGGTGATG 122368
Query 32111 CGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGA 32170
| ||||| ||| || ||||| ||| || |||||||| ||||| | |||||| | |
Sbjct 122369 CCTCGCTTCAGCAGACGATTGTTGGCCTGGCGCAGAACTTCGTCGGCTCCAATAACATCA 122428
Query 32171 ACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGA 32230
| | |||||||| || | ||||| | || | || || | |||||||| |
Sbjct 122429 ATCTCCTCGAGCCCAGCGGTAACTTTGGTTCTCGTATTCAGGGCGGTAGCGATGCTGCCA 122488
Query 32231 GCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGG 32290
| | |||||||| | ||| || || | || | || || | ||| || |||
Sbjct 122489 GTGCTCGTTACATTTACACGCGGCTTTCTCCGCTTGCACGTAAAGTCTTCCACGTTGCGG 122548
Query 32291 ACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACA 32350
| || ||| | ||| || || || ||||| || ||| ||||||| | |||
Sbjct 122549 ATGAGGCGCTCCTCGAGCACGATCAAGATGATGGCAAGCCAATCGAGCCAACCATGTACG 122608
Query 32351 GTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
||| || |||||||||||| | || ||||| || || || || || || ||
Sbjct 122609 TTCCTGTCCTTCCGATGATCCTCGTCAACGGCGCGGACGGTATTGGCACTGG 122660
Score = 86.0 bits (94), Expect = 7e-12
Identities = 146/209 (70%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 31333 TTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAG 31392
||||| || || || | ||||| ||| || ||||||||||||||||| | | |||
Sbjct 121552 TTCGGCGTTTTCCCATTGCGAGGAAAGATGCTCAACGTTCGTGACGCCTCTATCGACCAG 121611
Query 31393 GTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCATGGCAAG 31452
|| | | || | ||| | || | || ||| || |||| || ||||| |||
Sbjct 121612 ATTTCTAAGAACCAGGAGATCCAAAATATCAAGAAGTTCATCGGACTGCAGCACAAGAAG 121671
Query 31453 GTATATA---ATTCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCGACGCA 31509
| ||||| || || |||| || |||||||||| | ||||||| ||||||||
Sbjct 121672 GAATATACGGAT--ACCAAGAGCCTT-CGGTACGGTCACATCATGATCATGACCGATCAG 121728
Query 31510 GATCTCGACGGCAGTCACATCAAGGGTCT 31538
|||| ||| |||||||| |||||||| ||
Sbjct 121729 GATCACGATGGCAGTCATATCAAGGGCCT 121757
>seq41
Length=302175
Score = 84.2 bits (92), Expect = 2e-11
Identities = 166/243 (68%), Gaps = 6/243 (2%)
Strand=Plus/Minus
Query 15162 CTCGGCGGCCGCCTTGCTCGCCGAGTAAGGGTTGCTCGGGTTCAG--GGGTGACGTCTCA 15219
||| || |||||||||||||||||||| ||||| | || ||| || || ||||
Sbjct 72162 CTCTGCCGCCGCCTTGCTCGCCGAGTATGGGTTTGTGGGTGCCAGCAGGCTGGTTTCTCC 72103
Query 15220 TCTGACGTGGTCAATGGAC-CCACCTCACCGTACACCTCATCCGTGCTTATATGAATAAA 15278
| ||| | || | | ||||||| ||||||||||| |||||| || || || ||
Sbjct 72102 CAGGTCGTCGCCATTCTCCTCCACCTCCCCGTACACCTCGTCCGTGGAAATGTGTATGAA 72043
Query 15279 CTTTTTAAGCTTGCCGTAATCCTTGGCGGTCTCGAGAAGCACGTGCGTCCCGAGTACGTT 15338
||| || | | || | |||| ||| |||| || || ||||| || ||| ||| ||
Sbjct 72042 CTTCTTGACC---CCATGTGCCTTTGCGCTCTCAAGTAGGACGTGTGTGCCGTATACATT 71986
Query 15339 ATCCTTTGTAAACTGAAAAGACTGTTCGAAACTGCGGTCAACGCACGACTGTGCCGCAAA 15398
|| || ||||| | || | |||| || |||| ||| |||||| || || ||
Sbjct 71985 GGTGTTGGTGAACTGGTACGAGTTCCCGAAGCTCAGGTCGACGTGCGACTGCGCGGCGAA 71926
Query 15399 GTG 15401
|||
Sbjct 71925 GTG 71923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570302315850080
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