Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq12 165 9e-36 seq125 161 1e-34 seq63 131 2e-25 seq22 102 9e-17 seq76 98.7 1e-15 seq41 84.2 2e-11 >seq12 Length=708323 Score = 165 bits (182), Expect = 9e-36 Identities = 732/1138 (64%), Gaps = 52/1138 (5%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 ||||||||| | ||||| ||||| | || || || ||| ||||||||| || || Sbjct 539736 CCACATGTCATACTGCAGAATGCCTTGGGAAGCGGGGCTACCCTGGAACGTCTCATAGGG 539677 Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660 ||| | |||||| |||||| || | |||| || ||||| || ||| ||| || Sbjct 539676 GCCGTGTTGCTTGGCGAGCTCAATGGAGGCAGTAAGAGCAGCGTGGTAGATGGTCTCGAA 539617 Query 80661 GACGCCCTTGTTCACACCGCGC---GCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 || |||| | | || |||| || ||||| | || | | || Sbjct 539616 GATCTGAATGTTGAG---GTGCTTGGCCTCAGGAGAATCGAAGGGCATACGAAGAGCCAG 539560 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 ||| | || || || || | || || | || || ||||| |||||| |||| | || Sbjct 539559 GAAAGCATCGGCGAGACCGTTGACACCAACAGCAATGGGGCGATGGCGCATGTT-GCTC- 539502 Query 80778 CTCG--GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835 ||| |||||||| | ||||| ||| | ||||||| ||||||||| | || Sbjct 539501 CTCCTAGCCTCCGGCACGGGGTAGTGGTTGATGTCGATGATCTTGTTCAGGTT-CTTGAC 539443 Query 80836 -ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTCAC 80888 | || | || ||||||||||| |||| ||||| | || | | || || Sbjct 539442 GAGCACTTGAGTGACATCATGAAGCTTCTTGAAGTCATAAACTCCCTGCTCGACATTGAC 539383 Query 80889 AAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAA 80948 ||| | ||||| |||||| || || ||||| || || ||||| |||| | || | Sbjct 539382 AAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTGTA 539323 Query 80949 CTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGA 81008 |||||| || || ||| | || || || || || ||||| |||||||| Sbjct 539322 CTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCT 539263 Query 81009 CTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTT 81068 |||| |||||| ||||||||| |||| | ||| | || ||||||||||| | || Sbjct 539262 CTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCCTC 539203 Query 81069 GAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCAC 81128 || ||||||| ||| | || | || || || || || || | | Sbjct 539202 AAGAATGGCGTACCAGAGCTTCTGGGCACGAACGGTCTCACGACCCCGACCCTCCTTCTC 539143 Query 81129 ATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTC 81188 |||| |||| | ||||||| | | |||| | || | || | |||||||| Sbjct 539142 GTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGGCACTC 539083 Query 81189 GTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCGTC 81245 ||| ||||||||||| ||| |||| ||||| || ||| ||||||||| || Sbjct 539082 GTTGGGGCACATCAGAGTCCA---GGTGCCGTTCTGTTCGACACGCTTCATGAAGAGATC 539026 Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTG 81303 |||||||| || ||| |||||||| || |||||| |||| || | || ||||| Sbjct 539025 GGGGATCCACAGAGCGTAAAACAGGTCACG--AGCGCGAACCTCTTCCTTTCCGTGGTTC 538968 Query 81304 AGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATC 81363 ||| | || || ||| | || || |||||||| ||||| || || | ||||| Sbjct 538967 TTGCGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGAAT 538908 Query 81364 GACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | || | |||| ||||||||||| ||| || ||||| || ||| | ||| Sbjct 538907 GCACC---GGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACA 538851 Query 81418 CGCAACATAGGGATGATACCATCTGACTG--ACCGTTCGTACCCACGATA-CGCGACCCC 81474 || | |||||| |||| || | || ||| |||||| || || | ||| || || Sbjct 538850 CGGAGCATAGGAATGAGGCCGT-TG-CTGGTACCGTTGGTGCCAGCAATATAGCTGCCAG 538793 Query 81475 TTG-GCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533 | | ||| || || |||| || ||||| ||||| | ||| |||||| || Sbjct 538792 TAGCGCGAATACGGTGGACATTG--AGGCCGATACCACCGGCGGTCTTGGAAATCATGGC 538735 Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593 || |||| ||| || || || ||||| ||||| || | |||||||| | | ||| Sbjct 538734 GCAGGTCTTCAGGGTATCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAA 538675 Query 81594 ACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGT 81649 ||| | || |||||| || ||| ||||| ||||| || | | ||||||| Sbjct 538674 GCAGGAAGCCAGCTGAGG--CTTGGGAGTACCGGCGTTGAAGAGAGCT---GTCGCGT 538622 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || || |||||||||||||| |||||||| || |||||| ||| | |||| Sbjct 540251 GCCTGGGTACGGAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGC 540192 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || || ||| ||| | | || || | || |||| ||||| || ||||| |||||| Sbjct 540191 ATGGAGGTGATCTTGCCCATCGTAGGATCCTTCATGTGAATGTTGAGGGACTGCGACTGA 540132 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCAT 80180 |||||| || ||||| || || ||||| Sbjct 540131 TCGATGAAGGCACCACGGTCAGCAGCCAT 540103 >seq125 Length=94255 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || |||||||| || || ||||| || || Sbjct 36159 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36218 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||| | || || |||||||||||||| || || || |||||| Sbjct 36219 GATACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGACCAG 36278 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || |||||||| || ||||| | ||| || || | ||||| || Sbjct 36279 CAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCGGACTACAAC 36338 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || | || |||||||||| ||||| Sbjct 36339 ATCCAGAAGGAGTCCACACTCCACTTGGTGCTGCGTCTTCGTGGTGG 36385 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || |||||||| || || ||||| || || Sbjct 36387 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATCACGCTCGAGGTGGAATCTTCG 36446 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||| | || || ||||| |||||||| ||||| || |||||| Sbjct 36447 GATACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAG 36506 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || |||||||| || || || | |||||| || | ||||| || Sbjct 36507 CAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGACGGTCGTACGCTGTCCGACTACAAC 36566 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | |||||||| || ||||| || | || | ||||| || ||||| || Sbjct 36567 ATTCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGTGGCCA 36616 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || |||||||| ||||| |||| ||| | || | ||| Sbjct 35672 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGATACCATCGACAACGTCAAGAGC 35731 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| || ||||| || ||||||||||| || || || || || ||| Sbjct 35732 AAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGCAAG 35791 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || | || |||| || ||||| | || || || |||| ||||| || || |||||| Sbjct 35792 CAGTTGGAAGATGGCCGCACCCTGTCGGATTACAACATCCAGAAGGAGTCGACCCTTCAT 35851 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || |||||||| Sbjct 35852 CTCGTCCTCCGCCTGCGCGGTGG 35874 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| ||| | ||| | ||| | ||| | Sbjct 35955 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCTGACACCATCGACAATGTCAAGTCG 36014 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| |||||||| || ||||| ||||||||||| | || || ||||| ||| Sbjct 36015 AAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 36074 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | || ||||| | ||||| || |||| ||||| |||||| || Sbjct 36075 CAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAC 36134 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || ||||| ||||| Sbjct 36135 CTCGTCCTCCGCCTTCGTGGTGG 36157 >seq63 Length=225829 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || || ||||| ||||| ||| | ||| Sbjct 137910 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCAT 137969 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| || || |||||||||||||| ||||| || ||||||||||| || Sbjct 137970 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 138029 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| | ||||| || |||| || Sbjct 138030 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 138089 Query 27594 GG 27595 || Sbjct 138090 GG 138091 >seq22 Length=487495 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || |||||||||||| | ||||| ||||| ||||| || ||| Sbjct 63945 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAG 64004 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| ||| || || | || || || |||| ||||| ||||| ||||| || || | Sbjct 64005 GATGGTCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 64064 Query 27619 CGTCTTCGCGGTGG 27632 || || || || || Sbjct 64065 CGCCTGCGTGGCGG 64078 >seq76 Length=193090 Score = 98.7 bits (108), Expect = 1e-15 Identities = 269/412 (65%), Gaps = 0/412 (0%) Strand=Plus/Plus Query 31991 TCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACA 32050 ||||||| || ||||||||| | ||| | ||| |||||| ||||||| | |||| Sbjct 122249 TCAAGCCAGGTCAACGCAAGGTGCTCTACACTTGCTTCAAGAGGAACCTGAAAAAGGACA 122308 Query 32051 TGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGG 32110 | ||||| | || | |||| ||| | || | ||| ||| | |||| || | Sbjct 122309 TCAAGGTCAACGAACTTGCCGGCTTCGTTGGAGGTCTAACCAACTACGCCTACGGTGATG 122368 Query 32111 CGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGA 32170 | ||||| ||| || ||||| ||| || |||||||| ||||| | |||||| | | Sbjct 122369 CCTCGCTTCAGCAGACGATTGTTGGCCTGGCGCAGAACTTCGTCGGCTCCAATAACATCA 122428 Query 32171 ACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGA 32230 | | |||||||| || | ||||| | || | || || | |||||||| | Sbjct 122429 ATCTCCTCGAGCCCAGCGGTAACTTTGGTTCTCGTATTCAGGGCGGTAGCGATGCTGCCA 122488 Query 32231 GCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGG 32290 | | |||||||| | ||| || || | || | || || | ||| || ||| Sbjct 122489 GTGCTCGTTACATTTACACGCGGCTTTCTCCGCTTGCACGTAAAGTCTTCCACGTTGCGG 122548 Query 32291 ACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACA 32350 | || ||| | ||| || || || ||||| || ||| ||||||| | ||| Sbjct 122549 ATGAGGCGCTCCTCGAGCACGATCAAGATGATGGCAAGCCAATCGAGCCAACCATGTACG 122608 Query 32351 GTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 ||| || |||||||||||| | || ||||| || || || || || || || Sbjct 122609 TTCCTGTCCTTCCGATGATCCTCGTCAACGGCGCGGACGGTATTGGCACTGG 122660 Score = 86.0 bits (94), Expect = 7e-12 Identities = 146/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 31333 TTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAG 31392 ||||| || || || | ||||| ||| || ||||||||||||||||| | | ||| Sbjct 121552 TTCGGCGTTTTCCCATTGCGAGGAAAGATGCTCAACGTTCGTGACGCCTCTATCGACCAG 121611 Query 31393 GTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCATGGCAAG 31452 || | | || | ||| | || | || ||| || |||| || ||||| ||| Sbjct 121612 ATTTCTAAGAACCAGGAGATCCAAAATATCAAGAAGTTCATCGGACTGCAGCACAAGAAG 121671 Query 31453 GTATATA---ATTCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCGACGCA 31509 | ||||| || || |||| || |||||||||| | ||||||| |||||||| Sbjct 121672 GAATATACGGAT--ACCAAGAGCCTT-CGGTACGGTCACATCATGATCATGACCGATCAG 121728 Query 31510 GATCTCGACGGCAGTCACATCAAGGGTCT 31538 |||| ||| |||||||| |||||||| || Sbjct 121729 GATCACGATGGCAGTCATATCAAGGGCCT 121757 >seq41 Length=302175 Score = 84.2 bits (92), Expect = 2e-11 Identities = 166/243 (68%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 15162 CTCGGCGGCCGCCTTGCTCGCCGAGTAAGGGTTGCTCGGGTTCAG--GGGTGACGTCTCA 15219 ||| || |||||||||||||||||||| ||||| | || ||| || || |||| Sbjct 72162 CTCTGCCGCCGCCTTGCTCGCCGAGTATGGGTTTGTGGGTGCCAGCAGGCTGGTTTCTCC 72103 Query 15220 TCTGACGTGGTCAATGGAC-CCACCTCACCGTACACCTCATCCGTGCTTATATGAATAAA 15278 | ||| | || | | ||||||| ||||||||||| |||||| || || || || Sbjct 72102 CAGGTCGTCGCCATTCTCCTCCACCTCCCCGTACACCTCGTCCGTGGAAATGTGTATGAA 72043 Query 15279 CTTTTTAAGCTTGCCGTAATCCTTGGCGGTCTCGAGAAGCACGTGCGTCCCGAGTACGTT 15338 ||| || | | || | |||| ||| |||| || || ||||| || ||| ||| || Sbjct 72042 CTTCTTGACC---CCATGTGCCTTTGCGCTCTCAAGTAGGACGTGTGTGCCGTATACATT 71986 Query 15339 ATCCTTTGTAAACTGAAAAGACTGTTCGAAACTGCGGTCAACGCACGACTGTGCCGCAAA 15398 || || ||||| | || | |||| || |||| ||| |||||| || || || Sbjct 71985 GGTGTTGGTGAACTGGTACGAGTTCCCGAAGCTCAGGTCGACGTGCGACTGCGCGGCGAA 71926 Query 15399 GTG 15401 ||| Sbjct 71925 GTG 71923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570302315850080