Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq121 116 3e-21
>seq121
Length=97770
Score = 116 bits (128), Expect = 3e-21
Identities = 235/347 (68%), Gaps = 4/347 (1%)
Strand=Plus/Plus
Query 30112 GTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAG 30171
|||| ||||||||| |||| || ||||||||| | ||| | || |||||| | |
Sbjct 12197 GTCTGCGGGGTTCCACGCGCTCATGATGATGCGACGGTCATAGGGCTTGTTCTTCAGCTT 12256
Query 30172 GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT 30231
||| | ||| |||||||||||| ||| ||||| ||||| | | | ||||
Sbjct 12257 GTCAATCACGTCGGCCAGCTGATCCACGCCCTGCCCCGTATAGTCCGTCTTTGCGTCCAC 12316
Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291
|| || || ||||| || | ||| ||||| ||||| || || || ||||| || || ||
Sbjct 12317 ATATTCGGCGCCGAAGTGTCGCCATTGGAAGCCGTAGACGGGGCCAAGGTCGCCTTCCTC 12376
Query 30292 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30351
| |||| || ||| |||| | || || | || || ||| |||||||||||||
Sbjct 12377 GCGGTGCGAGAGGCCGACGCTGTCGAGGAACTCGCGAGATCCATTGCCGTCCCAGATCTT 12436
Query 30352 TACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30411
| || ||| || || || ||| |||| || ||||||||||| ||| ||
Sbjct 12437 GATGCCGGCCTCCGAAAGAGGCTTTGAGGATGTGATGCCGGCGACGAACCACAACAGTTC 12496
Query 30412 CTCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 30456
| || ||||| | || ||||| | ||| || |||||||| ||
Sbjct 12497 GGCGACAACGGC--GCGAAGGAAGACACGCTTTGTGGTGAGGAGCGG 12541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406304784536328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |