Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq125 114 8e-21
seq22 89.7 3e-13
>seq125
Length=94255
Score = 114 bits (126), Expect = 8e-21
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||||| |||||| ||||| ||| |||||| || ||||| || || ||
Sbjct 36385 CCACCACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAG 36326
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| ||||| || |||||||| || || | |||||| |||||||||||
Sbjct 36325 AGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 36266
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 36265 ATACCCTCCTTGTCCTGGATCTT 36243
Score = 102 bits (112), Expect = 5e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || ||||| ||||||||||||||| || || || || || ||
Sbjct 36604 AGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGA 36545
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| || || |||||||| || || | |||||| |||||||| || | ||||||
Sbjct 36544 CCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCC 36485
Query 34609 TTGTCTGTGATCTT 34622
|| || ||||||
Sbjct 36484 TTATCCTGGATCTT 36471
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||||||||||||||| || ||||| || || || || || || |||| ||||| ||
Sbjct 36133 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGC 36074
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| || || || || || ||||| |||||||| || | |||||||| || ||||||
Sbjct 36073 TTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTT 36015
>seq22
Length=487495
Score = 89.7 bits (98), Expect = 3e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || || | ||| | || || ||| |||||| || ||||| ||||| |||
Sbjct 64078 CCGCCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 64019
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| || || || || || || |||||||| |||||||| ||
Sbjct 64018 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGA 63959
Query 34600 ACTCCCTCCTTGTCTGT 34616
| ||||||||||||||
Sbjct 63958 ATGCCCTCCTTGTCTGT 63942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314725250240222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |