Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq121 125 6e-24
>seq121
Length=97770
Score = 125 bits (138), Expect = 6e-24
Identities = 172/235 (73%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844
||||||||||||| ||| | ||| | | ||||| || || ||||| |||| |||
Sbjct 12204 GGGTTCCACGCGCTCATGATGATGCGACGGTCATAGGGCTTGTTCTTCAGCTTGTCAATC 12263
Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTC 6903
|||| |||||| ||| | ||||| |||| |||||||| ||| || || | ||| ||
Sbjct 12264 ACGTCGGCCAGCTGATCCACGCCCTGCCCCGTATAGTCCGTCTTTGCGTCCAC-ATATTC 12322
Query 6904 CGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGA 6963
|| || ||||||| ||| ||||| |||||||| ||||| | |||||| ||||| ||
Sbjct 12323 GGCGCCGAAGTGTCGCCATTGGAAGCCGTAGACGGGGCCAAGGTCGCCTTCCTCGCGGTG 12382
Query 6964 TGGGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| || || ||| |||| || || || ||||| || | |||||||||||||
Sbjct 12383 CGAGAGGCCGACGC-TGTCGAGGAACTCGCGAGATCCATTGCCGTCCCAGATCTT 12436
Score = 125 bits (138), Expect = 6e-24
Identities = 172/235 (73%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCG 34386
||||||||||||| | || ||||| || || || |||| ||| || || | ||
Sbjct 12436 AAGATCTGGGACGGCAATGGATCTCGCGAGTTCCTCGACA-GCGTCGGCCTCTCGCACCG 12378
Query 34387 GGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
||||| |||||| | ||||| |||||||| ||||| ||| ||||||| || || || ||
Sbjct 12377 CGAGGAAGGCGACCTTGGCCCCGTCTACGGCTTCCAATGGCGACACTTCGGCGCCGAATA 12318
Query 34447 TCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCG 34505
| | || || ||| |||||||| |||| ||||| | ||| |||||| ||||||| |
Sbjct 12317 T-GTGGACGCAAAGACGGACTATACGGGGCAGGGCGTGGATCAGCTGGCCGACGTGATTG 12259
Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560
||| ||||| || || ||||| | | ||| | ||| |||||||||||||
Sbjct 12258 ACAAGCTGAAGAACAAGCCCTATGACCGTCGCATCATCATGAGCGCGTGGAACCC 12204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448256045880480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |