Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq125 172 1e-37
seq63 156 1e-32
seq22 102 2e-16
seq12 86.0 1e-11
>seq125
Length=94255
Score = 172 bits (190), Expect = 1e-37
Identities = 152/190 (80%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || ||||| || ||||| || |||||||| ||||||| ||||| | ||||||
Sbjct 35859 AGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCATCT 35800
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| |||||||||||||| || ||||| || |||| ||||||||||||
Sbjct 35799 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC 35740
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || || || ||||| || ||||| |||
Sbjct 35739 TGGATCTTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTC 35680
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 35679 TTGCCGGTGA 35670
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| || |||||||| || |||||||| || |||| || ||
Sbjct 36380 ACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGT 36321
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || |||||||| || || || ||||| || || | ||
Sbjct 36320 GCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACC 36261
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| |||||||| |||||||| || || ||| ||||||||
Sbjct 36260 CTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAG 36201
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||||||||| || || | ||||||
Sbjct 36200 CGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||| ||||| ||||| ||||| || || | || || | || |||
Sbjct 36598 AGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACGACCGTCT 36539
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| || || || ||||| || |||| || ||||| |||
Sbjct 36538 TCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTATCC 36479
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| |||||||| || || ||| |||||||| ||||| |||
Sbjct 36478 TGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTC 36419
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| ||||| || || | ||||||
Sbjct 36418 TTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
Score = 145 bits (160), Expect = 2e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| |||||| ||| || |||||||| || || | |||||
Sbjct 36152 ACGAAGGCGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 36093
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||| |||||||| | ||| || ||||| ||||| | ||
Sbjct 36092 GCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCC 36033
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||||||||| || || || |||||||||||||| || ||||||||
Sbjct 36032 CTCCTTATCCTGGATCTTCGACTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAG 35973
Query 211073 AGTGATCGTCTTTCCCGT 211090
||||| ||||| || ||
Sbjct 35972 GGTGATGGTCTTGCCAGT 35955
>seq63
Length=225829
Score = 156 bits (172), Expect = 1e-32
Identities = 142/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||||| | ||||| || ||||||||||| ||||||||
Sbjct 138089 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138030
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| || ||||||||||||||||| || || || |||
Sbjct 138029 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 137970
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||||||| || |||||||| ||||| ||||| |||||||| ||||| || ||
Sbjct 137969 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 137911
>seq22
Length=487495
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| |||||||| || |||||||| ||||||| ||| || | |||||
Sbjct 64063 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCATCC 64004
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| ||||| || | || || ||||| || |||| || ||||||||
Sbjct 64003 TCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 63945
>seq12
Length=708323
Score = 86.0 bits (94), Expect = 1e-11
Identities = 182/269 (68%), Gaps = 6/269 (2%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|||| |||||| ||||||||||| | |||| ||| || |||||| ||||||||
Sbjct 539282 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG-TGG--TCCTTGTACAGCATGAAGGGG 539226
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
| || ||| | |||||| | |||||| | ||| |||| |||||| || || |||
Sbjct 539225 TTGCCAGTCTCGACCTGAGCCTCAAGAATGGCGTACCAGAGCTTCTGGGCACGAACGGTC 539166
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
| | || || |||||||||| | ||| || ||||||| || || |||
Sbjct 539165 TCACGACCCCGACCCTCCTTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAG 539106
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324
|| || | ||||| || ||| |||||||| | ||| |||| |||| | |
Sbjct 539105 ACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCG 539046
Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCA 178353
|| || ||||||||||| || | | ||||
Sbjct 539045 ACACGCTTCATGAAGAGATCGGGGATCCA 539017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159135158245910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |