Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq125 105 2e-17
seq63 96.9 8e-15
>seq125
Length=94255
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| |||||||| || ||||| || |||||||||||||| | | || | |||||
Sbjct 35860 GAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCATC 35801
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| | || |||||||||||||| | ||||||||||| | || |||||||| ||
Sbjct 35800 TTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC 35741
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | | || || ||| || ||||| || || ||
Sbjct 35740 CTGGATCTTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGT 35681
Query 152072 TTTGCCCGTGA 152082
||||| ||||
Sbjct 35680 CTTGCCGGTGA 35670
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | ||| | || || || |
Sbjct 36365 CAAG-TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCCTCAA 36307
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | ||||||||||| || ||| || ||||| || || |
Sbjct 36306 GCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTTGTCCTGGA 36247
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | | | || ||| || || || || || ||||| || |
Sbjct 36246 TCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGTGATAGTCTTTC 36187
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||||||||| ||||||| ||||||
Sbjct 36186 CAGTGAGAGTCTTGACGAAGATCTGCAT 36159
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || ||||| ||||| ||||| |||||||| |||| | || |
Sbjct 36605 GAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGACAGCGTACG 36546
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || ||||||||||| || | ||||||||||| | || || ||
Sbjct 36545 ACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTC 36486
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || || || | || | | | || ||| || || || || ||
Sbjct 36485 CTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACCTCGAGCGT 36426
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || ||||| ||||| ||||||| ||||||
Sbjct 36425 GATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387
>seq63
Length=225829
Score = 96.9 bits (106), Expect = 8e-15
Identities = 134/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | || | ||||| || || || |||||||||||
Sbjct 138089 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138030
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | || || ||||| || || || || |||||| | ||
Sbjct 138029 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 137970
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | |||| || ||| || || || || || || ||||||||||| ||||| ||||||
Sbjct 137969 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 137910
Query 152097 ACCTGCA 152103
|||||
Sbjct 137909 --CTGCA 137905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153804035704914
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |