Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq125 181 2e-40 seq63 141 2e-28 seq22 102 2e-16 seq95 93.3 9e-14 >seq125 Length=94255 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || |||||||||||||| | Sbjct 36386 ACCACCACGAAGACGCAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGA 36327 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || ||||| ||||||| ||| || ||||| ||| Sbjct 36326 GAGAGTGCGACCGTCCTCAAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 36267 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| ||||||| || ||||||| ||| || Sbjct 36266 GATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCAC 36207 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 36206 CTCGAGCGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 36159 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | || || ||||| ||||||||||| | Sbjct 36613 CCACCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAC 36554 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || || || || || || || ||||| ||||| | ||| || ||||| ||| Sbjct 36553 AGCGTACGACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 36494 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || |||||||| | || ||| ||||||| || ||||||| ||| || Sbjct 36493 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36434 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 36433 TCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||||| || || |||||||||||||| | Sbjct 36158 ACCACCACGAAGGCGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 36099 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || || || |||||||| || || ||||| || Sbjct 36098 CAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGG 36039 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| | || || | ||||| ||||| || | ||||| Sbjct 36038 GATGCCCTCCTTATCCTGGATCTTCGACTTGACATTGTCGATGGTGTCAGACGACTCGAC 35979 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 ||||| ||||| ||||| || |||| Sbjct 35978 CTCGAGGGTGATGGTCTTGCCAGTCA 35953 Score = 123 bits (136), Expect = 5e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||||||| || || ||||| | || || || ||||||||||| || | Sbjct 35875 ACCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 35816 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || | || || ||||| ||||| | || || ||||| || Sbjct 35815 CAGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 35756 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || |||||||| |||||| ||||| || ||| | ||||| || ||||| | |||| Sbjct 35755 AATGCCTTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGA 35697 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | || || ||||| ||||| || || Sbjct 35696 CCTCAAGGGTGATGGTCTTGCCGGT 35672 >seq63 Length=225829 Score = 141 bits (156), Expect = 2e-28 Identities = 141/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || |||||||||||||| || || || ||||| |||||| Sbjct 138089 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138030 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 | || || ||||| ||||| ||||||||||| |||||| ||||| || || | || Sbjct 138029 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 137971 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| || | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 137970 GATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 137911 >seq22 Length=487495 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||||||||| || || || || | ||| || || ||||||||||| || | Sbjct 64079 ACCGCCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 64020 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| |||||||| || || || || || || |||||||| || ||||| || Sbjct 64019 AAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGGGG 63960 Query 282992 AATACCCTCCTTGTCT 283007 ||| |||||||||||| Sbjct 63959 AATGCCCTCCTTGTCT 63944 >seq95 Length=147769 Score = 93.3 bits (102), Expect = 9e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286 |||||||||| || |||| ||| | || || || || ||||| || || || | | | Sbjct 14290 TCGGCATGAACGCCAATCTTATGCGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGG 14231 Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346 |||| || || || |||| | || ||||||| |||||||||| || |||||| || Sbjct 14230 TGGCACTGGGCAACAAGAAGTTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACA 14171 Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCG 230406 | || || | || || || ||||||||||| ||||| || | || || || | | | | Sbjct 14170 TCTCGCTTAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAAGGCGG 14111 Query 230407 GTGT 230410 |||| Sbjct 14110 GTGT 14107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046723991533636