Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1972 260 2e-64 seq32 136 5e-27 >seq1972 Length=10305 Score = 260 bits (288), Expect = 2e-64 Identities = 1317/2070 (64%), Gaps = 59/2070 (3%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| || || || || | | ||||||| |||||||||||| || || | Sbjct 8631 GTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAG 8572 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | |||| || ||| |||||| ||| | ||| | ||||| || Sbjct 8571 CCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 8512 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || || ||||| |||||| ||||||||| || || || | || |||||||||| | | Sbjct 8511 TGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAACG 8452 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || ||| | ||||||||||| || || |||| ||| || || |||||| | Sbjct 8451 ATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 8392 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 || | | || ||||||||||||||||| | || || | || || || | || | Sbjct 8391 TTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCATGTTGTCGGAC 8332 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | ||| | | | ||||| || || || |||||||| |||||| Sbjct 8331 CAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATGGGTTGACGACTTGAAACTCTCCA 8272 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | | || | || | || || || || || || || | | | ||||| || Sbjct 8271 GCAAGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCA 8212 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT-CTAAGACC 53283 | |||||| | ||| ||||| ||||||||||| || || || | | || | || || Sbjct 8211 AGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAAC-AAGAAGCGAGTTGCGAACTCC 8153 Query 53284 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 53343 || | |||| | || | || ||||||| ||| | || | ||| ||| Sbjct 8152 GTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGTAACACC 8093 Query 53344 NNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGT 53399 ||| || ||| || ||||| | | ||| || || |||| Sbjct 8092 CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGG----AGCCTTGGTAAGTCTCGT 8037 Query 53400 ATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 53456 |||| || |||||| || | | || | || || ||| ||| || |||| Sbjct 8036 ATGGGCCAAGTTCCTTTGCAACC--TCGACGGATGAGGTC-AAGGCAGCGTGGTAGATGG 7980 Query 53457 TTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 53515 | ||||| || | | || |||| |||| ||||| || ||||||||| | ||| Sbjct 7979 TCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAAATGGAAGACG-AAG 7922 Query 53516 AG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | || ||| || || || | ||||||||||||| | ||||||||| || | || Sbjct 7921 GGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAAT 7863 Query 53574 TAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632 | | |||| | ||||||||| ||||| || || || || || || || || | |||| Sbjct 7862 T-GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTTCAAGTTT 7804 Query 53633 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC-----TA 53687 || |||| |||| || || || | || || | ||||| | ||| || | Sbjct 7803 CTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCTCATTCATG 7744 Query 53688 TT-ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 53746 || ||||| | || ||||| || |||| |||||| || ||||||| | | Sbjct 7743 TTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCATCCGGTGCA 7684 Query 53747 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 53806 | || | | ||||| ||||| | || || ||||| || | || | ||| Sbjct 7683 GAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGG 7624 Query 53807 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGG 53866 || ||||| ||||| || ||||| || ||||| ||||| || | || || || | || Sbjct 7623 TTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGA 7564 Query 53867 GATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT 53926 | || | ||| | | ||| | | ||||| || || ||| | ||| || Sbjct 7563 GCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGAT---AGTCTTGCGACCCTTGCCT 7507 Query 53927 --CTT-TCGTATAGT--GTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATC 53981 ||| || || | ||| | | | || ||||| || || |||||| |||| | Sbjct 7506 GCCTTCTCATAACTTTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAGC 7449 Query 53982 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 54041 |||| || |||| ||| |||||||| | ||||||||||| | | || || ||||| | Sbjct 7448 CAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGA 7389 Query 54042 AGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 | |||||||||||||| | || ||| || ||||| | | | | ||| || || || Sbjct 7388 ATAGATCAGGAATCCACA-AGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCG 7330 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 || || ||||| || ||| | | || ||| | |||||| ||||| | ||| | Sbjct 7329 TGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACA 7270 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | | ||||| || ||||| || || ||||| | ||||| || ||||| || || Sbjct 7269 GCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAA 7210 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 |||| | ||| |||| |||||| ||||| || ||||| || | ||| || ||| Sbjct 7209 ACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCA 7150 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 | |||||||| | ||| ||||| || || || || | || ||||| | || Sbjct 7149 GTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCA 7090 Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400 || || || ||||| ||||| || || ||||| || ||| |||| | | || || Sbjct 7089 CAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAG 7030 Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460 || || | ||| | ||| || || ||| | || || |||||||| ||| Sbjct 7029 CATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTA 6970 Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATG 54519 || | || | || | | || || || |||||||| || || || || | || Sbjct 6969 AAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCG-TG 6911 Query 54520 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 54579 ||| || || || |||||||| | ||| || || || | || | | ||| | | Sbjct 6910 AATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCATCAAG 6851 Query 54580 TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 54637 | | || ||| || | || || || || ||||| | ||| ||||| ||| Sbjct 6850 ACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGAAA--TCT 6793 Query 54638 CGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 54697 || || || | || | |||||||||| || | || | | |||| |||| | ||| Sbjct 6792 CGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACAT---TCGTA 6737 Query 54698 A---TACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAA 54753 | | |||| ||| || ||||| | | |||||| | || || ||| | |||| Sbjct 6736 AGTTTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAA 6677 Query 54754 ATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 54813 ||| || || | |||| |||| || |||| |||||| || ||||| || || || Sbjct 6676 ATCGCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTTGAGACTGCAAT 6617 Query 54814 TCTAGCGGCTAGAATGGCATAATCCGGATG 54843 | ||| ||||||||||||||||| ||||| Sbjct 6616 ACGAGCAGCTAGAATGGCATAATCGGGATG 6587 >seq32 Length=157973 Score = 136 bits (150), Expect = 5e-27 Identities = 355/532 (67%), Gaps = 17/532 (3%) Strand=Plus/Plus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 |||||| || |||||||| ||||| || | || ||||| || || || || || | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT-C 23949 || || ||||| |||||||| ||| |||| |||| | || ||| | ||| | | | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAG-TACTTGTCGTTAC 142287 Query 23950 CCAATTCAGAAATCAAT---CTATCTGCGACAAACTCCATATATGTTTTCATCATTTCAC 24006 |||| ||||| | | ||| || || ||||| || ||| ||||| | | Sbjct 142288 CCAA---AGAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGG 142344 Query 24007 AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGA 24066 | ||||| || | || | ||||||||| | || | || ||||||||||| || Sbjct 142345 AGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGA 142404 Query 24067 CCGCGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTT 24123 | || || || || | |||| || | || ||| | || || | | | ||| Sbjct 142405 CAGCTTCGGTGATGACG--TCTTGGACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGG 142461 Query 24124 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 24183 || | | |||||||||||| ||| ||||| || || | || | |||||||| Sbjct 142462 AGAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGG 142521 Query 24184 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 24243 | || ||||| |||| ||| || |||||||| || |||||||| ||||| || || |||| Sbjct 142522 AGAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATC 142581 Query 24244 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG- 24302 |||| ||||| || || || || || || || || | || | || || | || | Sbjct 142582 CAGAGAAGAAGATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGT 142641 Query 24303 --CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352 |||| || |||||||| |||||| ||||||||||| || | ||| || Sbjct 142642 TCTTGTCTTGGATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 Score = 100 bits (110), Expect = 3e-16 Identities = 224/334 (67%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttC--ATTACTATCTTTAACATATGTATCAA 24414 ||||| ||||| || || ||||| | |||| ||| || | || | |||||| || | Sbjct 142754 GTCTCAATAGCGTTGAAAAGATATGTCTTTTGGGATTGCT--CCTTGATATATGTGTCGA 142811 Query 24415 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 24474 | | ||| || |||| || || ||||| || || ||||| || |||||||| | Sbjct 142812 TGAGAAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 142871 Query 24475 ATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTA 24534 |||||||||| | || || ||||| || |||| || | || || || || || | Sbjct 142872 ATCTAGCCTCTGGGATTTGAACTTCGCCACTGAATCTCTCAACCAAGTTCTCGTTGACAA 142931 Query 24535 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 24594 |||| || ||||| || || || | || || || || || ||||| Sbjct 142932 TTCCATCGGATGCTGCGAAGAATGCGAGGACGTGGGAAATGAAGTAACGCTCGTCGTCAT 142991 Query 24595 TTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 24651 | ||| | |||||| || | | ||| || |||| ||| | ||||| | ||||| | Sbjct 142992 TGAGTCTCTCATTCCAGTCGTGAAGATCCTTTGATAAATCAATCTCTTCTGCGGTCCAGA 143051 Query 24652 ATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685 | |||||||||||||| || ||||| | |||||| Sbjct 143052 AAGATGCCTCTGCCTTCTTGTACATTTGCCAGAT 143085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593634768216000