Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq306 131 2e-25 seq32 131 2e-25 seq102 87.8 2e-12 seq477 84.2 2e-11 >seq306 Length=72094 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||||||||||||| |||| || || | | Sbjct 24811 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 24752 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||| ||||| | ||||| Sbjct 24751 GACACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCCGACCAA 24692 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| || || || || || || | ||||||||| |||||||||| Sbjct 24691 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAAC 24632 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| |||| || || | ||||| || Sbjct 24631 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTACG 24597 >seq32 Length=157973 Score = 131 bits (144), Expect = 2e-25 Identities = 305/455 (67%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | |||||| | || | || |||| | | || | Sbjct 142680 AGAAGGCCGACTGGGCTGTCAAGTGGATCCAAGACAAGAACTCCACCTTTGCTCAACGTC 142621 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||| || || ||||| ||||||| || || ||||| |||| |||| Sbjct 142620 TCGTCGCTTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGATCCTTCGCTTCCATCTTTT 142561 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || |||||| |||| || || ||| |||||| ||||||||| | | Sbjct 142560 GGCTCAAGAAGCGTGGTCTCATGGCCGGTCTCACCTTCTCCAACGAACTCATCTCCCGTG 142501 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 | || ||||| || ||| || || || | || ||| ||| | ||| || || | Sbjct 142500 ATGAAGGTCTTCACACCGATTTCGCATGCCTCCTTTTCTCCCATCTCAAGCACCG-CCCA 142442 Query 117222 GCGCGGCGCG-CGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | || | |||| || || ||||||| || |||| || || || ||| | Sbjct 142441 TCCAAGCAAGCCGTCCAAGACGTCATCACCGAAGCTGTCGAGATTGAACAAGAGTTCTTG 142382 Query 117281 ACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339 ||||| || || || |||| ||| |||| | || | | | ||| ||||||||| Sbjct 142381 ACCGAGGCTCTTCCTTGTGC-TCTCTTGGGCATGAACTCCAACCTCATGAAGCAATACAT 142323 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 ||||||||| ||||| | || || || ||| || |||| ||||||| | | Sbjct 142322 CGAGTTCGTTGCCGATCGTCTCCTCCTTTCTTTGGGTAACGACAAGTACTACAAATCTGC 142263 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 |||||| | ||||| ||| | |||||||||| Sbjct 142262 CAACCCATTCGACTTCATGGAGAATATCTCCTTGG 142228 Score = 123 bits (136), Expect = 3e-23 Identities = 198/284 (70%), Gaps = 3/284 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||||| || ||| | || | Sbjct 143085 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTA 143026 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||||| ||||||| ||| | | || ||| ||||||| | ||||| Sbjct 143025 TCAAAGGATCTTCACGACTGGAATGAGAGACTCAATGACGACGAGCGTTACTTCATTTCC 142966 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| || ||| || || ||||||||||| |||| ||| | Sbjct 142965 CACGTCCTCGCATTCTTCGCAGCATCCGATGGAATTGTCAACGAGAACTTGGTTGAGAGA 142906 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | || || || | | ||||| | ||||||||||| || || ||| ||| Sbjct 142905 TTCAGTGGCGAAGTTCAAATCCCAGAGGCTAGATGCTTCTACGGTTTCCAAATCATGATG 142846 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 |||||| | ||||| |||| || || ||||||||||| || Sbjct 142845 GAGAACATCCACTCCGAAACATACTCCCTTCTCATCGACACATA 142802 >seq102 Length=67028 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| |||||||| | || ||||| || | |||| | | Sbjct 14623 TTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCTGACACCATC 14564 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | |||| || || | ||||| ||||| || ||| | || || ||||| | Sbjct 14563 GACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTG 14504 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || || || || |||| || || ||| |||||||||||||| ||| Sbjct 14503 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTACAACATCCAAAAG 14444 Query 40879 G 40879 | Sbjct 14443 G 14443 >seq477 Length=47751 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || ||||| | || || || | | Sbjct 22498 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATCACTTTGGAGGTTGAGTCATCG 22557 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || |||| ||||| ||||| ||||| | || || Sbjct 22558 GACACTATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAA 22617 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| || || || || || || || | ||||| || |||||||||| Sbjct 22618 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 22677 Query 40870 ATCCAGAAGGA 40880 ||||| ||||| Sbjct 22678 ATCCAAAAGGA 22688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515143849192000