Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq477 113 7e-20 seq183 98.7 1e-15 >seq477 Length=47751 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || || || || || ||| | ||| |||| || Sbjct 22498 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATCACTTTGGAGGTTGAGTCATCG 22557 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || || |||||||| || || ||||| |||||||||||| Sbjct 22558 GACACTATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAA 22617 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || || ||| | || ||| | || || | || || || Sbjct 22618 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 22677 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| |||||||| || |||||||| | ||| | || |||||||| Sbjct 22678 ATCCAAAAGGAATCAACCTTACATTTGGTCCTTCGTCTTCGTGGTGGTAT 22727 >seq183 Length=14837 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 205561 ACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGA 205620 |||| |||||| |||| |||||||||||| | |||| | | |||| | Sbjct 5708 ACATAAAATTGCGCAAACATATGACAAGGTGGCAATGCCATCAACTTGATATCTGCTACA 5649 Query 205621 TTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATA 205680 ||||| || | || || || ||||| || ||||| || | || || ||| Sbjct 5648 TTCCATGCACTCAAAATGATTCTTCTATCCCATGGATTATTCTTGAGCTTCCATACAATT 5589 Query 205681 TGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCA 205740 | || ||||||||||| ||||| |||||||| ||| || ||| |||||||| || Sbjct 5588 TCTGCTAATTGATCAACACCTTGTCCTGTATAATCTGTCTCGGCATCGATATATTTGGCG 5529 Query 205741 CCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787 || ||||| ||||||||||| ||||| || ||||| || || ||||| Sbjct 5528 CCGAAATGTCGCCATTGAAATCCATAGACGGGACCCAAGTCTCCTTC 5482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755345514560000