Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1972 239 4e-58 seq32 132 4e-26 seq477 84.2 2e-11 >seq1972 Length=10305 Score = 239 bits (264), Expect = 4e-58 Identities = 498/742 (67%), Gaps = 0/742 (0%) Strand=Plus/Minus Query 23235 TGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCA 23294 ||||| | | ||| || ||| ||| | || || || || | || ||| || |||| Sbjct 7511 TGCCTGCCTTCTCATAACTTTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCA 7452 Query 23295 GGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCA 23354 ||| || | | |||| ||||| | | ||||| | || |||||||| || ||| Sbjct 7451 AGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCA 7392 Query 23355 TAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGC 23414 | || ||||| || ||||| | || ||||| || ||||| || || || || || || | Sbjct 7391 TGAATAGATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTAC 7332 Query 23415 CGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAA 23474 || ||| || || ||| | ||| || || || ||||||||||| || || ||||| | Sbjct 7331 CGTGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGA 7272 Query 23475 CGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGT 23534 | ||||| || || || | ||| || || || |||||||| || | ||| ||||||||| Sbjct 7271 CAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGA 7212 Query 23535 ACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAAC 23594 | |||| ||||| || || | ||||||||| ||| || || | | || Sbjct 7211 AAACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCAC 7152 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | | || |||| |||||| || | ||| || || || | ||||| ||||| | Sbjct 7151 CAGTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGG 7092 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | || |||| ||| |||||||| || || || |||||||| || | ||| | || Sbjct 7091 CACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGA 7032 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 | || || || | ||| |||| || ||| | ||||| || ||||| ||| ||||| | Sbjct 7031 AGCATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTG 6972 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 ||||||| || ||||| | || || || ||||| || || ||||| || |||| Sbjct 6971 TAAAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCGT 6912 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAA 23894 | ||||| | ||| || ||||| ||||| | ||| || | ||| | ||| | || Sbjct 6911 GAATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCATCAA 6852 Query 23895 TTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCAC 23954 || |||||||| || | | || || || || ||||| | ||||| || || | Sbjct 6851 GACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGAAATCTC 6792 Query 23955 GATCGTGCACTATGGCCGAATT 23976 | || | || ||||| || || Sbjct 6791 GGTCATAGACGATGGCAGAGTT 6770 >seq32 Length=157973 Score = 132 bits (146), Expect = 4e-26 Identities = 231/333 (69%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| |||||||| ||||| || ||||||| ||||| | || | Sbjct 143085 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTA 143026 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| || ||||| || ||| | | || ||| Sbjct 143025 TCAAAGGATCTTCACGACTGGAATGAGAGACTCAATGACGACGAGCGTTACTTCATTTCC 142966 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| ||||||||||| ||||| |||||||| ||||| || ||| Sbjct 142965 CACGTCCTCGCATTCTTCGCAGCATCCGATGGAATTGTCAACGAGAACTTGGTTGAGAGA 142906 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||||| ||| | | ||||| |||||||| ||||| || ||| | || Sbjct 142905 TTCAGTGGCGAAGTTCAAATCCCAGAGGCTAGATGCTTCTACGGTTTCCAAATCATGATG 142846 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAACGA 57865 || ||| | || || |||| || || || |||||||| || || | ||||| ||| Sbjct 142845 GAGAACATCCACTCCGAAACATACTCCCTTCTCATCGACACATATATCAAGGAGCAATCC 142786 Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898 | | | || || || |||||||| || || || Sbjct 142785 CAAAAGACATA-TCTTTTCAACGCTATTGAGAC 142754 >seq477 Length=47751 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| |||||||| || || || || |||||| |||| || || | ||||| | ||| Sbjct 22280 TCGTCAAGACTCTTACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCG 22339 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | ||||| | || |||||||||||| | || ||||| || |||||| | | Sbjct 22340 ACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTGA 22399 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | || || || ||||| | || || || | |||||| ||||||||||| | Sbjct 22400 TTTTTGCCGGTAAACAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAGG 22459 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || ||||| | || || ||||| | || |||| Sbjct 22460 AATCTACCCTTCACTTAGTTCTCAGACTTCGTGGTGGTA 22498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445701206664000