Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1972 242 5e-59 seq32 141 1e-28 >seq1972 Length=10305 Score = 242 bits (268), Expect = 5e-59 Identities = 1314/2077 (63%), Gaps = 73/2077 (4%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| || || || || | | ||||||| |||||||||||| || || | Sbjct 8631 GTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAG 8572 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| || ||| |||||| || | ||| | ||||| || Sbjct 8571 CCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 8512 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || || ||||| |||||| ||||||||| || || || | || |||||||||| | | Sbjct 8511 TGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAACG 8452 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || || ||| | ||||||||||| || || |||| ||| || || |||||| | Sbjct 8451 ATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 8392 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 || | | || ||||| ||||||||||| | || || | || || || | || | Sbjct 8391 TTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCATGTTGTCGGAC 8332 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | ||| | | | ||||| ||||| || ||||| || |||||| Sbjct 8331 CAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATGGGTTGACGACTTGAAACTCTCCA 8272 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | | || | || | || || || || || || || | | ||||| || Sbjct 8271 GCAAGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCA 8212 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT-CTAAGACC 62521 | |||||| | ||| ||||| ||||||||||| || || || | | || | || || Sbjct 8211 AGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAAC-AAGAAGCGAGTTGCGAACTCC 8153 Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANN 62581 || | |||| | || | | ||||||| ||| | || | ||| |||| Sbjct 8152 GTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGTAACACC 8093 Query 62582 NNNNNNNNNATATTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCAT 62637 |||||| || ||| || ||||| | | ||| || || || | Sbjct 8092 CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGG----AGCCTTGGTAAGTCTCGT 8037 Query 62638 ATGGTCC---TTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGG 62694 |||| || |||||| || | | || | || || ||| ||| || |||| Sbjct 8036 ATGGGCCAAGTTCCTTTGCAACC--TCGACGGATGAGGTC-AAGGCAGCGTGGTAGATGG 7980 Query 62695 TTTCAAAGATCTTCTTATTTAGAT-CTTGTGCTTCCGGGCTATCAAATGGATAATTTAAG 62753 | || || || | | || |||| |||| ||||| ||| ||||||||| | ||| Sbjct 7979 TCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAAATGGAAGACG-AAG 7922 Query 62754 AG--AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62811 | || ||| || || || | ||||||||||||| | ||||||||| || | || Sbjct 7921 GGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAAT 7863 Query 62812 TAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62870 | | |||| | ||||||||| ||||| || || || || || || || || | ||| Sbjct 7862 T-GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTTCAAGTTT 7804 Query 62871 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT 62927 || |||| |||| || || || | || || | ||||| | || | ||| || Sbjct 7803 CTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCTCATTCATG 7744 Query 62928 ---ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCC 62984 ||||| | || |||| || |||| ||||| || ||||||| | | Sbjct 7743 TTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCATCCGGTGCA 7684 Query 62985 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 63044 | || | | ||||| ||||| | || || || || || | || | ||| Sbjct 7683 GAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGG 7624 Query 63045 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63104 || ||||| ||||| || ||||| || ||||| ||||| || | || || || | ||| Sbjct 7623 TTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGA 7564 Query 63105 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG-------TATCT 63157 | || | ||| | | ||| | | | ||||| || || ||| | || Sbjct 7563 GCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGAT---AGTCTTGCGACCCTTGCCT 7507 Query 63158 CCTTTCTC-----TTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG 63212 | ||||| ||||||| |||| | ||||||| || || |||||| Sbjct 7506 GCCTTCTCATAACTTTCGTAGAGAGCCT---------CGAACTCCTCGCCATAAACATCT 7456 Query 63213 TCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 63272 |||| | ||| || |||| ||| |||||||| | ||||||||||| | | || || Sbjct 7455 GCCAAGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGC 7396 Query 63273 TTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTC 63331 ||||| || |||||||||||||| | || ||| || ||||| | || | | ||| || Sbjct 7395 TTCATGAATAGATCAGGAATCCACA-AGGCATAGAAGAGATCGCGTGCACGAACTTCTTC 7337 Query 63332 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63391 || || || || ||||| || ||| | | || ||| | |||||| ||||| | Sbjct 7336 CTTACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAG 7277 Query 63392 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63451 ||| | || | | | ||||| || ||||| || || ||||| | ||||| || ||||| Sbjct 7276 GTAGACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTT 7217 Query 63452 ATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63511 || |||||| | ||| |||| ||||||||| || | || |||||||| | ||| || Sbjct 7216 GTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTA 7157 Query 63512 GCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63571 | ||| | |||||||| | ||| ||||| || || || || | || ||||| Sbjct 7156 TGCACCAGTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGAT 7097 Query 63572 TAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAG 63631 | || || || || || || ||||| || || || || || || |||| | | Sbjct 7096 CATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGAT 7037 Query 63632 TAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63691 || || || || | ||| | | ||| || || ||| | || || ||||| Sbjct 7036 GAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGC 6977 Query 63692 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CC 63750 ||| ||||| | || | || | | || || || || ||||| || || || | Sbjct 6976 GTGTGTAAAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATC 6917 Query 63751 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGT 63810 | | ||||| || || || |||||||| | ||| || || || | || ||| |||| Sbjct 6916 ACCG-TGAATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGC 6858 Query 63811 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 63868 | | || | || ||| || | || || || || ||||| | ||| ||| Sbjct 6857 CATCAAGACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGA 6798 Query 63869 AAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATC 63928 || ||||| || || | || | || ||||| | || | || | | |||| | || Sbjct 6797 AA--TCTCGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACAT- 6742 Query 63929 CATGGTAA---TACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 63984 | |||| | |||| ||| || ||||| | | |||||| | || || ||| | Sbjct 6741 --TCGTAAGTTTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATT 6684 Query 63985 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 64044 | ||||||| || || | |||| |||| || |||| ||||| || ||||| | Sbjct 6683 GGTATAAATCGCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTTGAGA 6624 Query 64045 TGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 || || | || ||||||||||||||||| ||||| Sbjct 6623 CTGCAATACGAGCAGCTAGAATGGCATAATCGGGATG 6587 >seq32 Length=157973 Score = 141 bits (156), Expect = 1e-28 Identities = 354/531 (67%), Gaps = 15/531 (3%) Strand=Plus/Plus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 |||||| || |||||||| ||||| || | || ||||| || || || ||||| | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTA--AAtttttttAAAT 33395 ||| || ||||| |||||||| || || || |||| | ||||| | || | | | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTA-- 142286 Query 33396 CCCAATTCAGAAATCAAT---CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCA 33452 ||||| ||||| | | ||| || ||||| || || ||| ||||| | | Sbjct 142287 CCCAA---AGAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTG 142343 Query 33453 CAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGAT 33512 | ||||| || | ||| | ||||||||| | || | || ||||||||||| Sbjct 142344 GAGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCG 142403 Query 33513 ACCGCATTTGTTATAATAAATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTT 33571 || || | || || | | |||| || ||| | || || || | ||| Sbjct 142404 ACAGCTTCGGTGATGACGTCTTGGACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGA 142462 Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 || | | |||||||||||| ||| ||||| || || | || | |||||| || Sbjct 142463 GAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGA 142522 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 || ||||| |||| ||| || |||||||| || |||||||| ||||||||||| ||||| Sbjct 142523 GAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCC 142582 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG-- 33749 || |||||||| || || || ||||| || || | || | | || | || | Sbjct 142583 AGAGAAGAAGATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGTT 142642 Query 33750 -CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 |||| || |||||||| |||||| ||||||||||| || | ||| || Sbjct 142643 CTTGTCTTGGATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 Score = 89.7 bits (98), Expect = 6e-13 Identities = 196/293 (67%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 33843 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33902 || || | ||| || ||||| | ||| || |||| || || ||||| || || Sbjct 142793 TCCTTGATATATGTGTCGATGAGAAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATG 142852 Query 33903 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT 33962 || || || |||||||| ||||||||||| | || || ||||| || |||| || Sbjct 142853 ATTTGGAAACCGTAGAAGCATCTAGCCTCTGGGATTTGAACTTCGCCACTGAATCTCTCA 142912 Query 33963 GCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 34022 | || || || || || |||||||| ||||| || || || | || || || Sbjct 142913 ACCAAGTTCTCGTTGACAATTCCATCGGATGCTGCGAAGAATGCGAGGACGTGGGAAATG 142972 Query 34023 AAATATTTTTCGTCTGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCC 34079 || || ||||| | ||| | |||||| || | | ||| || |||| ||| Sbjct 142973 AAGTAACGCTCGTCGTCATTGAGTCTCTCATTCCAGTCGTGAAGATCCTTTGATAAATCA 143032 Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132 | ||||| | ||||| || |||||||||||||| || ||||| | |||||| Sbjct 143033 ATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACATTTGCCAGAT 143085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629725489176000