Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1972 266 4e-66 seq32 114 2e-20 >seq1972 Length=10305 Score = 266 bits (294), Expect = 4e-66 Identities = 1318/2070 (64%), Gaps = 59/2070 (3%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| || || || || | | ||||||| |||||||||||| || || | Sbjct 8631 GTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAG 8572 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| || ||| |||||| || | ||| | ||||| || Sbjct 8571 CCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 8512 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || || ||||| |||||| ||||||||| || || || | || |||||||||| | | Sbjct 8511 TGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAACG 8452 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || || ||| | ||||||||||| || || |||| ||| || || |||||| | Sbjct 8451 ATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 8392 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 || | | || ||||| ||||||||||| || || || | || || || | || | Sbjct 8391 TTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCATGTTGTCGGAC 8332 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | ||| | | | ||||| || || || |||||||| |||||| Sbjct 8331 CAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATGGGTTGACGACTTGAAACTCTCCA 8272 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | | || | || | || || || || || || || | | | ||||| || Sbjct 8271 GCAAGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCA 8212 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT-CTAAGACC 65314 | |||||| | ||| ||||| ||||||||||| || || || | | || | || || Sbjct 8211 AGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAAC-AAGAAGCGAGTTGCGAACTCC 8153 Query 65315 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 65374 || | |||| | || | || ||||||| ||| | || | ||| ||| Sbjct 8152 GTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGTAACACC 8093 Query 65375 NNNNnnnnnnnNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGT 65430 ||| || ||| || ||||| | | ||| || || |||| Sbjct 8092 CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGG----AGCCTTGGTAAGTCTCGT 8037 Query 65431 ATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 65487 |||| || |||||| || | | || | || || ||| ||| || |||| Sbjct 8036 ATGGGCCAAGTTCCTTTGCAACC--TCGACGGATGAGGTC-AAGGCAGCGTGGTAGATGG 7980 Query 65488 TTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 65546 | ||||| || | | || |||| |||| ||||| || ||||||||| | ||| Sbjct 7979 TCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAAATGGAAGACG-AAG 7922 Query 65547 AG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | || ||| || || || | ||||||||||||| | ||||||||| || | || Sbjct 7921 GGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAAT 7863 Query 65605 TAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663 | | |||| | ||||||||| ||||| || || || || || || || || | ||| Sbjct 7862 T-GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTTCAAGTTT 7804 Query 65664 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATT 65720 || |||| |||| || || || | || || | ||||| | || ||||| || Sbjct 7803 CTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCTCATTCATG 7744 Query 65721 ---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 65777 ||||| | || |||| || |||| |||||| || ||||||| | | Sbjct 7743 TTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCATCCGGTGCA 7684 Query 65778 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 65837 | || | | ||||| ||||| | || || ||||| || | || | ||| Sbjct 7683 GAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGG 7624 Query 65838 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 65897 || ||||| ||||| || ||||| || ||||| ||||| || | || || || | ||| Sbjct 7623 TTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGA 7564 Query 65898 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT 65957 | || | ||| | | ||| | | | ||||| || || ||| | ||| || Sbjct 7563 GCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGAT---AGTCTTGCGACCCTTGCCT 7507 Query 65958 --CTT-TCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 66012 ||| || || | ||| | | | |||||||| || || |||||| |||| | Sbjct 7506 GCCTTCTCATAACTTTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAGC 7449 Query 66013 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 66072 |||| || |||| ||| |||||||| | ||||||||||| | | || || ||||| | Sbjct 7448 CAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGA 7389 Query 66073 AGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 | |||||||||||||| | || ||| || | ||| | | | | ||| || || || Sbjct 7388 ATAGATCAGGAATCCACA-AGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCG 7330 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 || || ||||| || ||| | | || ||| |||||| ||||| | ||| | Sbjct 7329 TGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACA 7270 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | | ||||| || ||||| || || ||||| | ||||| || ||||| || || Sbjct 7269 GCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAA 7210 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 |||| | ||| |||| |||||| ||||| | || ||||| || | ||| || ||| Sbjct 7209 ACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCA 7150 Query 66312 CTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 66371 | |||||||| | ||| ||||| || || || || | || ||||| | || Sbjct 7149 GTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCA 7090 Query 66372 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 66431 || || || ||||| ||||| || || ||||| || ||| |||| | | || || Sbjct 7089 CAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAG 7030 Query 66432 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 66491 || || | ||| | ||| || || ||| | || || |||||||| ||| Sbjct 7029 CATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTA 6970 Query 66492 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 66550 || | || | || | | || || || || ||||| || || || || | || Sbjct 6969 AAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCG-TG 6911 Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 66610 ||| || || || |||||||| | ||| || || || | || | | ||| | | Sbjct 6910 AATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCATCAAG 6851 Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 66668 || | || ||| || | || || || || ||||| | ||| ||||| ||| Sbjct 6850 ACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGAAA--TCT 6793 Query 66669 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 66728 || || || | || | |||||||||| || | || | | |||| |||| | ||| Sbjct 6792 CGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACAT---TCGTA 6737 Query 66729 A---TACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 66784 | | |||| ||| || ||||| | | |||||| | || || ||| | | |||| Sbjct 6736 AGTTTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAA 6677 Query 66785 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 66844 ||| || || | |||| |||| || |||| |||||| || ||||| || || || Sbjct 6676 ATCGCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTTGAGACTGCAAT 6617 Query 66845 TCTAGCGGCTATAATGGCATAATCCGGATG 66874 | ||| |||| |||||||||||| ||||| Sbjct 6616 ACGAGCAGCTAGAATGGCATAATCGGGATG 6587 >seq32 Length=157973 Score = 114 bits (126), Expect = 2e-20 Identities = 348/531 (66%), Gaps = 15/531 (3%) Strand=Plus/Plus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 |||||| || |||||||| ||||| || | || ||||| || || || || || | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATA--AAtttttttAAAT 35971 || || ||||| |||||||| |||||||| ||| | || || | || | | | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTA-- 142286 Query 35972 CCCAATTCAGAAATCAAT---CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCA 36028 ||||| ||||| | | ||| || || || || || ||| ||||| | | Sbjct 142287 CCCAA---AGAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTG 142343 Query 36029 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAG 36088 | ||||| || | || | ||||||||| | || | || ||||||||||| | Sbjct 142344 GAGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCG 142403 Query 36089 ACCGCGTCTGTTATAATAGATATTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTT 36147 || || || || || | | || | || ||| | || || | | | ||| Sbjct 142404 ACAGCTTCGGTGATGACGTCTTGGACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGA 142462 Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207 || | | |||||||||||| ||| ||||| || || | || | ||||||||| Sbjct 142463 GAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGA 142522 Query 36208 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 36267 || ||||| |||| ||| || |||||||| || |||||||| ||||| || || ||||| Sbjct 142523 GAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCC 142582 Query 36268 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---C 36324 ||| ||||| || || || || || || || || | || | | || | || Sbjct 142583 AGAGAAGAAGATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGTT 142642 Query 36325 ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375 |||| || |||||||| |||||| ||||||||||| || | ||| || Sbjct 142643 CTTGTCTTGGATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658076542228000