Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1972 221 2e-52 seq32 131 2e-25 >seq1972 Length=10305 Score = 221 bits (244), Expect = 2e-52 Identities = 916/1416 (65%), Gaps = 38/1416 (3%) Strand=Plus/Minus Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCCGGGCTATCAAATGGATA 71501 || ||||| |||||||| | | || |||| |||| ||||| ||| ||||||||| Sbjct 7986 TAGATGGTCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAAATGGAAG 7928 Query 71502 ATTTAAGAG--AATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGT 71559 | ||| | || ||| || || || | |||||||| |||| | ||||||||| ||| Sbjct 7927 ACG-AAGGGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGA 7870 Query 71560 CTCTTATTAGAAATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 71618 | ||| | |||| | ||||||||| ||||| || || || || || || || || Sbjct 7869 CGGAAATT-GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTT 7811 Query 71619 GAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---TCTCCC 71675 | ||||| || | |||| || || || | || || | ||||| | || | | Sbjct 7810 CAAGTTTCTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCTC 7751 Query 71676 ATCTAT-TACAAACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732 || || | | | | ||| || |||| || |||| |||||| || ||||||| Sbjct 7750 ATTCATGTTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCATC 7691 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 71792 | | | || | | ||| || ||||| | || || ||||| || | || Sbjct 7690 CGGTGCAGAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTT 7631 Query 71793 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTC 71852 | ||| || ||||| ||||| || ||||| || ||||| || || || | || || || Sbjct 7630 CTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTC 7571 Query 71853 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCT 71912 | |||| || | ||| | | ||| | | | ||||| || | ||||| | Sbjct 7570 GGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGAT---AGTCTTGCGACC 7514 Query 71913 CTTTTCT--CTT-TCGTA--TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTG 71967 ||| || ||| || || || ||| | | | |||||||| || || || ||| Sbjct 7513 CTTGCCTGCCTTCTCATAACTTTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCT 7456 Query 71968 TCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTC 72025 | || ||||| || |||||||| |||||||| | ||||||||| | || ||| || | Sbjct 7455 GCCAAGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGT--TCTTTTCAACAC 7398 Query 72026 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCC 72084 | ||||| || |||||||||||||| | || ||| || ||||| | | | | || Sbjct 7397 GCTTCATGAATAGATCAGGAATCCACA-AGGCATAGAAGAGATCGCGTGCACGAACTTCT 7339 Query 72085 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 72144 || || || || || ||||| || ||| | | || ||| | |||||| ||||| Sbjct 7338 TCCTTACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCA 7279 Query 72145 AAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 72204 | ||| | || | | | || || || ||||| || || ||||| | ||||| || ||| Sbjct 7278 AGGTAGACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTG 7219 Query 72205 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 72264 || || |||||| | ||| |||| |||||| ||||| || ||||| || | ||| Sbjct 7218 TTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATG 7159 Query 72265 TAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 72324 || ||| | |||||||| || ||| ||||| || || || || | || ||| Sbjct 7158 TATGCACCAGTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAG 7099 Query 72325 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 72384 || | || || || || ||||| ||||| || || ||||| || ||| |||| | Sbjct 7098 ATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCG 7039 Query 72385 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 72444 | || || || || | ||| | ||| || || ||| | || || ||| Sbjct 7038 ATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAA 6979 Query 72445 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC- 72503 ||||| ||||| | || | |||| | || || || || ||||| ||| || || Sbjct 6978 GCGTGTGTAAAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCA 6919 Query 72504 CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTT 72563 || | || || || || || |||||||| | ||| || || || | || | | || Sbjct 6918 TCACCG-TGAATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTT 6860 Query 72564 GTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 72621 | || | || | || ||| || | || || || || ||||| | ||| | Sbjct 6859 GCCATCAAGACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTT 6800 Query 72622 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATA 72681 |||| ||||| || || | || | || ||||||| || | || | | |||| | | Sbjct 6799 GAAA--TCTCGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACA 6743 Query 72682 TCCATGGTGATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 72740 | | | | |||| ||| || ||||| | | |||||| | || || ||| | Sbjct 6742 TTCGTAAGTTTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTG 6683 Query 72741 GAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATAC 72800 | ||||||| || || | |||| |||| || |||| ||||| || ||||| || Sbjct 6682 GTATAAATCGCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTTGAGAC 6623 Query 72801 GGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 || || | || ||||||||||||||||| ||||| Sbjct 6622 TGCAATACGAGCAGCTAGAATGGCATAATCGGGATG 6587 Score = 111 bits (122), Expect = 2e-19 Identities = 201/291 (69%), Gaps = 5/291 (2%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || ||||| || | || || || | ||||||| ||||||||| || || || | Sbjct 8631 GTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAG 8572 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || | |||| || ||| |||||| || | ||| || | ||||||| || Sbjct 8571 CCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTG-TAGGATCCTTCAT 8513 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||| ||||| || ||| ||||||||| || || || | || |||||||||| | Sbjct 8512 GTGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAAC 8453 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 ||| || ||| | ||||||||||| || || |||| ||| || || |||||| Sbjct 8452 GATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAAT 8393 Query 71040 GTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087 ||| | | || ||||| ||||||||||| || || || | ||||| || Sbjct 8392 GTTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCAT 8342 >seq32 Length=157973 Score = 131 bits (144), Expect = 2e-25 Identities = 354/533 (66%), Gaps = 19/533 (4%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 |||||| || |||||||| ||||| || | || ||||| || || |||||||| | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATA--AAtttttttAAAT 41878 ||| || ||||| |||||||| || || || |||| | || || | || | | | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTA-- 142286 Query 41879 CCCAATTCAGAAATCAAT---CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCA 41935 ||||| ||||| | | ||| || | ||| || || ||| ||||| | | Sbjct 142287 CCCAA---AGAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTG 142343 Query 41936 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAG 41995 | ||||| || | || | ||||||||| | || | || ||||||||||| | Sbjct 142344 GAGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCG 142403 Query 41996 ACCGCGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGT 42052 || || || || || | |||| || | || ||| | || || | | | ||| Sbjct 142404 ACAGCTTCGGTGATGACG--TCTTGGACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGG 142460 Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || | | |||||||||||| ||| ||||| ||||| | || | ||||||| Sbjct 142461 GAGAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTG 142520 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || || ||||| |||| ||| || |||||||| || |||||||| || || || || ||| Sbjct 142521 GAGAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGAT 142580 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG-- 42230 ||||| |||||||| || || || || || || || | || | | || | || Sbjct 142581 CCAGAGAAGAAGATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAG 142640 Query 42231 -CACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282 |||| || |||||||| |||||| ||||||||||| || | ||| || Sbjct 142641 TTCTTGTCTTGGATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671041045892000