Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq32 118 2e-21 seq183 87.8 3e-12 >seq32 Length=157973 Score = 118 bits (130), Expect = 2e-21 Identities = 195/273 (71%), Gaps = 14/273 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | |||||| | ||| | Sbjct 143085 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTA 143026 Query 125079 TCCAAGGACCTGTACGATTGG-----GAGACTCGTTTGACTGAAACTGAGCGAGAGTTTA 125133 || ||||| || |||| ||| ||||||| | ||| || ||||| | || | Sbjct 143025 TCAAAGGATCTTCACGACTGGAATGAGAGACTCAAT-GACG---AC-GAGCGTTACTTCA 142971 Query 125134 TATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTG 125192 | || ||| | | || ||||| || | ||||||||||| |||||||| || || ||| Sbjct 142970 TTTCCCACGTCCTCGCATTCTTCGCAGCATCCGATGGAATTGTCAACGAGAACTTGGTTG 142911 Query 125193 ACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAAT 125251 | | ||||| | || ||| | || ||||||| ||||| ||||| |||||||| Sbjct 142910 AGA-GATTCAGTGGCGAAGTTCAA-ATCCCAGAGGCTAGATGCTTCTACGGTTTCCAAAT 142853 Query 125252 CATGATTGAGAACGTGCACTCGGAAATGTACTC 125284 |||||| |||||| | ||||| |||| ||||| Sbjct 142852 CATGATGGAGAACATCCACTCCGAAACATACTC 142820 >seq183 Length=14837 Score = 87.8 bits (96), Expect = 3e-12 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133 |||| || || || ||||| || ||| | || | ||| |||| ||| | || ||||| Sbjct 5492 TGGGTCCCGTCTATGGATTTCAATGGCGACATTTCGGCGCCAAATATATCGATGCCGAGA 5551 Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACACTCTCAAGACC 70192 |||| ||| | || || |||||||||||||| ||||| ||| | | ||||||| Sbjct 5552 CAGATTATACAGGACAAGGTGTTGATCAATTAGCAGA-AATTGTATGGAAGCTCAAGAAT 5610 Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATG 70252 |||||| ||||| || ||| | || | |||||||| |||||| | | ||| Sbjct 5611 AATCCATGGGATAGAAGAATCATTTTGAGTGCATGGAATGTAGCAGATATCAAGTTGATG 5670 Query 70253 GCACTACCACCGTGTCA-CTGTTTGGCTCAGTTTTA 70287 ||| | ||||| ||||| ||||| || || ||||| Sbjct 5671 GCATTGCCACCTTGTCATATGTTT-GCGCAATTTTA 5705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740950820092000